RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 ZNF333Q96JL9 665 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 DEFB118Q96PH6 123 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 PANX2Q96RD6 677 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 ADPGKQ9BRR6 497 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 CRISPLD2Q9H0B8 497 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 KCNF1Q9H3M0 494 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 TMX1Q9H3N1 280 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 TMEM8AQ9HCN3 771 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 COQ4Q9Y3A0 265 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 CDY2AQ9Y6F7 541 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
TMEM40-204ENST00000435218 TTC26A0AVF1 554 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 ARVCFO00192 962 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 FECHP22830 423 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 PON1P27169 355 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 HOXA11P31270 313 aaPredicted RBP16.38■□□□□ 0.21
TMEM40-204ENST00000435218 MXI1P50539 228 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 CDK7P50613 346 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 CETN1Q12798 172 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 FAM26DQ5JW98 314 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 ZBTB41Q5SVQ8 909 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 KRT39Q6A163 491 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 NOTUMQ6P988 496 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 TRIM65Q6PJ69 517 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 C15orf39Q6ZRI6 1047 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 ZBTB33Q86T24 672 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 SENP6Q9GZR1 1112 aaPredicted RBP16.38■□□□□ 0.21
TMEM40-204ENST00000435218 MMRN2Q9H8L6 949 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 GCNT4Q9P109 453 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 GINS2Q9Y248 185 aa16.38■□□□□ 0.21
TMEM40-204ENST00000435218 LUC7L2Q9Y383 392 aaKnown RBP16.38■□□□□ 0.21
TMEM40-204ENST00000435218 NOL4O94818 638 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 TNFSF9P41273 254 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 AP3M2P53677 418 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 ADKP55263 362 aaKnown RBP16.37■□□□□ 0.21
TMEM40-204ENST00000435218 ZBED6P86452 979 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 CCZ1BP86790 482 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 CCZ1P86791 482 aaPredicted RBP16.37■□□□□ 0.21
TMEM40-204ENST00000435218 EPC2Q52LR7 807 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 SLC27A1Q6PCB7 646 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 DHX38Q92620 1227 aaKnown RBP16.37■□□□□ 0.21
TMEM40-204ENST00000435218 CCDC127Q96BQ5 260 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 CPB2Q96IY4 423 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 PCMTD1Q96MG8 357 aaPredicted RBP16.37■□□□□ 0.21
TMEM40-204ENST00000435218 FNBP1Q96RU3 617 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 DNAJC7Q99615 494 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 CGRRF1Q99675 332 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 CRACR2AQ9BSW2 395 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 TMEM117Q9H0C3 514 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 GANQ9H2C0 597 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 FAM207AQ9NSI2 230 aaPredicted RBP16.37■□□□□ 0.21
TMEM40-204ENST00000435218 CEP72Q9P209 647 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 ZKSCAN5Q9Y2L8 839 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 SQORQ9Y6N5 450 aa16.37■□□□□ 0.21
TMEM40-204ENST00000435218 RNF225M0QZC1 329 aaPredicted RBP16.36■□□□□ 0.21
TMEM40-204ENST00000435218 NRDCO43847 1150 aa16.36■□□□□ 0.21
TMEM40-204ENST00000435218 IL18RAPO95256 599 aa16.36■□□□□ 0.21
TMEM40-204ENST00000435218 CHRNA1P02708 482 aa16.36■□□□□ 0.21
TMEM40-204ENST00000435218 CLTAP09496 248 aa16.36■□□□□ 0.21
TMEM40-204ENST00000435218 KRT9P35527 623 aa16.36■□□□□ 0.21
TMEM40-204ENST00000435218 LBX1P52954 281 aa16.36■□□□□ 0.21
TMEM40-204ENST00000435218 TMEM139Q8IV31 216 aa16.36■□□□□ 0.21
TMEM40-204ENST00000435218 LMO3Q8TAP4 145 aa16.36■□□□□ 0.21
TMEM40-204ENST00000435218 LSM14BQ9BX40 385 aaKnown RBP16.36■□□□□ 0.21
TMEM40-204ENST00000435218 NAA15Q9BXJ9 866 aaKnown RBP16.36■□□□□ 0.21
TMEM40-204ENST00000435218 ABHD10Q9NUJ1 306 aa16.36■□□□□ 0.21
TMEM40-204ENST00000435218 TRMT13Q9NUP7 481 aaKnown RBP16.36■□□□□ 0.21
TMEM40-204ENST00000435218 NOD1Q9Y239 953 aa16.36■□□□□ 0.21
TMEM40-204ENST00000435218 EPHB6O15197 1021 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 B4GALT4O60513 344 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 SGPL1O95470 568 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 HSPA1AP0DMV8 641 aaKnown RBP16.35■□□□□ 0.21
TMEM40-204ENST00000435218 HSPA1BP0DMV9 641 aaKnown RBP16.35■□□□□ 0.21
TMEM40-204ENST00000435218 HARSP12081 509 aaKnown RBP16.35■□□□□ 0.21
TMEM40-204ENST00000435218 CAPN2P17655 700 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 SLC9A1P19634 815 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 FGFR4P22455 802 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 RFX1P22670 979 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 HNRNPH3P31942 346 aaKnown RBP16.35■□□□□ 0.21
TMEM40-204ENST00000435218 GRM5P41594 1212 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 KCNJ6P48051 423 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 GCLMP48507 274 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 WNT7BP56706 349 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 LRMPQ12912 555 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 ENOX2Q16206 610 aaKnown RBP16.35■□□□□ 0.21
TMEM40-204ENST00000435218 ZACNQ401N2 412 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 KLHDC7AQ5VTJ3 777 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 FAM228AQ86W67 206 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 CDR2LQ86X02 465 aaPredicted RBP16.35■□□□□ 0.21
TMEM40-204ENST00000435218 WDR49Q8IV35 697 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 THNSL1Q8IYQ7 743 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
TMEM40-204ENST00000435218 OR8K1Q8NGG5 319 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 CPLX3Q8WVH0 158 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 NUCKS1Q9H1E3 243 aaKnown RBP16.35■□□□□ 0.21
TMEM40-204ENST00000435218 PDE11AQ9HCR9 933 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 SIX2Q9NPC8 291 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 MYO6Q9UM54 1294 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 BRCA2P51587 3418 aa16.35■□□□□ 0.21
TMEM40-204ENST00000435218 DLATP10515 647 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms