RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 GLI1P08151 1106 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 HNRNPH3P31942 346 aaKnown RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 BLVRAP53004 296 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 PPP2R2AP63151 447 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 FUT2Q10981 343 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 COG2Q14746 738 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 SEC23AQ15436 765 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 GPR162Q16538 588 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 ZNF423Q2M1K9 1284 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 LMBRD2Q68DH5 695 aaPredicted RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 C8orf74Q6P047 294 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 IFT20Q8IY31 132 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 ZBTB38Q8NAP3 1195 aaPredicted RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 TTLL11Q8NHH1 800 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 CEP70Q8NHQ1 597 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 CALML6Q8TD86 181 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 STAMQ92783 540 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 SDCCAG3Q96C92 435 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 TRIM47Q96LD4 638 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 AIFM2Q9BRQ8 373 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 FAM129AQ9BZQ8 928 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 SEMA4AQ9H3S1 761 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 RNF14Q9UBS8 474 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 TSKSQ9UJT2 592 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 ANKRD34BA5PLL1 514 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 PHF20L1A8MW92 1017 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 MAGEB3O15480 346 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 SPATA31D3P0C874 917 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 CALM1P0DP23 149 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 CALM2P0DP24 149 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 CALM3P0DP25 149 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 ETS2P15036 469 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 IL32P24001 234 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 ANXA13P27216 316 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 MZF1P28698 734 aaPredicted RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 PPP1R2P41236 205 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 PAFAH1B1P43034 410 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 CCR3P51677 355 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 B2MP61769 119 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 NIPAL4Q0D2K0 466 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 EZH2Q15910 746 aaKnown RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 TJAP1Q5JTD0 557 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 SNRNP48Q6IEG0 339 aaKnown RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 KLHL35Q6PF15 583 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 LDHAL6AQ6ZMR3 332 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 SPATA31D4Q6ZUB0 917 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 CMTR1Q8N1G2 835 aaKnown RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 CCDC82Q8N4S0 544 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 NPLOC4Q8TAT6 608 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 CDKL2Q92772 493 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 XPO6Q96QU8 1125 aaKnown RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 ZKSCAN3Q9BRR0 538 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 DDX23Q9BUQ8 820 aaKnown RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 POLD4Q9HCU8 107 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 SLC12A6Q9UHW9 1150 aa7.8□□□□□ -1.16
GARNL3-205ENST00000435213 XPO7Q9UIA9 1087 aaKnown RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 RPL26L1Q9UNX3 145 aaKnown RBP7.8□□□□□ -1.16
GARNL3-205ENST00000435213 ZNF233A6NK53 670 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 RARAP10276 462 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 HSPA14Q0VDF9 509 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 TTLL12Q14166 644 aaPredicted RBP7.79□□□□□ -1.16
GARNL3-205ENST00000435213 ZCWPW2Q504Y3 356 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 ZNF746Q6NUN9 644 aaPredicted RBP7.79□□□□□ -1.16
GARNL3-205ENST00000435213 TTI2Q6NXR4 508 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 PDXDC1Q6P996 788 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 LRIG3Q6UXM1 1119 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 ARHGEF18Q6ZSZ5 1173 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 RIBC1Q8N443 379 aaPredicted RBP7.79□□□□□ -1.16
GARNL3-205ENST00000435213 BBOF1Q8ND07 529 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 ATL1Q8WXF7 558 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 ZNF75CPQ92670 426 aaPredicted RBP7.79□□□□□ -1.16
GARNL3-205ENST00000435213 DGCR14Q96DF8 476 aaKnown RBP7.79□□□□□ -1.16
GARNL3-205ENST00000435213 SCYL1Q96KG9 808 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 ERGIC2Q96RQ1 377 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 TUBGCP2Q9BSJ2 902 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 GDF3Q9NR23 364 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 LRWD1Q9UFC0 647 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 MOSPD1Q9UJG1 213 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 A0A1W2PQ67 120 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 GOLGA8IPA6NC78 632 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 TRIM49BA6NDI0 452 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 CNOT3O75175 753 aaKnown RBP7.79□□□□□ -1.16
GARNL3-205ENST00000435213 TRPA1O75762 1119 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 DDHD2O94830 711 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 RHOBTB3O94955 611 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 A1BGP04217 495 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 RXRBP28702 533 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 EIF2B2P49770 351 aaKnown RBP7.79□□□□□ -1.16
GARNL3-205ENST00000435213 AP3M2P53677 418 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 WASHC2DQ5SRD0 308 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 MAP3K21Q5TCX8 1036 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 VASH1Q7L8A9 365 aaPredicted RBP7.79□□□□□ -1.16
GARNL3-205ENST00000435213 MAGEB6Q8N7X4 407 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 LSMEM1Q8N8F7 131 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 PLEKHO2Q8TD55 490 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 GAB3Q8WWW8 586 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 COX4I2Q96KJ9 171 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 SNX25Q9H3E2 840 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 CCSER2Q9H7U1 834 aa7.79□□□□□ -1.16
GARNL3-205ENST00000435213 DCLRE1BQ9H816 532 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms