RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 COLEC11Q9BWP8 271 aa20.1■□□□□ 0.81
SMG1P3-201ENST00000435197 EIF2AQ9BY44 585 aaKnown RBP20.1■□□□□ 0.81
SMG1P3-201ENST00000435197 CNTNAP3Q9BZ76 1288 aa20.1■□□□□ 0.81
SMG1P3-201ENST00000435197 RNF39Q9H2S5 420 aa20.1■□□□□ 0.81
SMG1P3-201ENST00000435197 DHX33Q9H6R0 707 aaKnown RBP20.1■□□□□ 0.81
SMG1P3-201ENST00000435197 MIOSQ9NXC5 875 aa20.1■□□□□ 0.81
SMG1P3-201ENST00000435197 FNIP2Q9P278 1114 aa20.1■□□□□ 0.81
SMG1P3-201ENST00000435197 ZFP37Q9Y6Q3 630 aaPredicted RBP20.1■□□□□ 0.81
SMG1P3-201ENST00000435197 BTBD18B2RXH4 712 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 EML1O00423 815 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 NR1I2O75469 434 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 ZMYND10O75800 440 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 ERLIN2O94905 339 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 FSHRP23945 695 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 RFC5P40937 340 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 QARSP47897 775 aaKnown RBP20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 GPC5P78333 572 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 MCTP1Q6DN14 999 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 FUT10Q6P4F1 479 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 EXOC8Q8IYI6 725 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 GPR65Q8IYL9 337 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 FGF14Q92915 247 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 CEP170P1Q96L14 293 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 GPR62Q9BZJ7 368 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 BMP2KQ9NSY1 1161 aaPredicted RBP20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 NCDNQ9UBB6 729 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 PPME1Q9Y570 386 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 WDR87Q6ZQQ6 2873 aa20.09■□□□□ 0.81
SMG1P3-201ENST00000435197 CCDC194A0A1B0GVG4 234 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 KANSL1LA0AUZ9 987 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 M0R2N6 131 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 SPTLC1O15269 473 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 TSPAN1O60635 241 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 KRT37O76014 449 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 RPL17P18621 184 aaKnown RBP20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 USP41Q3LFD5 358 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 MOXD1Q6UVY6 613 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 PARM1Q6UWI2 310 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 RNF149Q8NC42 400 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 OXER1Q8TDS5 423 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 CCDC51Q96ER9 411 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 DDX23Q9BUQ8 820 aaKnown RBP20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 BCO2Q9BYV7 579 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 SPATA6Q9NWH7 488 aaPredicted RBP20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 WRAP73Q9P2S5 460 aaPredicted RBP20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 FBXO4Q9UKT5 387 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 HES2Q9Y543 173 aa20.08■□□□□ 0.81
SMG1P3-201ENST00000435197 DNAH14Q0VDD8 3507 aa20.08■□□□□ 0.8
SMG1P3-201ENST00000435197 GPR179Q6PRD1 2367 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 DKC1O60832 514 aaKnown RBP eCLIP20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 U2AF2P26368 475 aaKnown RBP eCLIP20.07■□□□□ 0.82e-8■□□□□ 10.1
SMG1P3-201ENST00000435197 AXLP30530 894 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 CREMQ03060 361 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 SNW1Q13573 536 aaKnown RBP20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 EMC2Q15006 297 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 VARS2Q5ST30 1063 aaKnown RBP20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 NOTUMQ6P988 496 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 FERMT3Q86UX7 667 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 TCP11Q8WWU5 503 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 BORCS6Q96GS4 357 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 APOL6Q9BWW8 343 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 DDX25Q9UHL0 483 aaKnown RBP20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 VAV3Q9UKW4 847 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 CDH7Q9ULB5 785 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 MTMR6Q9Y217 621 aa20.07■□□□□ 0.8
SMG1P3-201ENST00000435197 LAMTOR5O43504 91 aa20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 NUCB2P80303 420 aa20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 PRKCQQ04759 706 aa20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 NR5A1Q13285 461 aa20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 PPP2R5CQ13362 524 aa20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 PCBP1Q15365 356 aaKnown RBP eCLIP20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 MLF2Q15773 248 aaPredicted RBP20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 GRASPQ7Z6J2 395 aaPredicted RBP20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 NOSTRINQ8IVI9 506 aa20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 CPB2Q96IY4 423 aa20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 CSRNP2Q9H175 543 aa20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 ZSCAN16Q9H4T2 348 aaPredicted RBP20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 FBXW11Q9UKB1 542 aa20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 ADAM28Q9UKQ2 775 aa20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 CIZ1Q9ULV3 898 aaPredicted RBP20.06■□□□□ 0.8
SMG1P3-201ENST00000435197 ASAP2O43150 1006 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 SLC37A4O43826 429 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 ZSCAN22P10073 491 aaPredicted RBP20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 DDIT3P35638 169 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 NTHL1P78549 312 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 UBXN2BQ14CS0 331 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 PRSS55Q6UWB4 352 aaPredicted RBP20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 MTSS1LQ765P7 747 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 BRAPQ7Z569 592 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 GPR161Q8N6U8 529 aaKnown RBP20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 GSTCDQ8NEC7 633 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 TNFRSF25Q93038 417 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 OSBPL6Q9BZF3 934 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 NXF3Q9H4D5 531 aaKnown RBP20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 GIT1Q9Y2X7 761 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 MTF2Q9Y483 593 aaPredicted RBP20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 PCDHGA2Q9Y5H1 932 aa20.05■□□□□ 0.8
SMG1P3-201ENST00000435197 NOTCH4Q99466 2003 aa20.04■□□□□ 0.8
SMG1P3-201ENST00000435197 P4HBP07237 508 aaKnown RBP20.04■□□□□ 0.8
SMG1P3-201ENST00000435197 SDHBP21912 280 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms