RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PNPLA7Q6ZV29 1317 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 TTLL1O95922 423 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 XRCC5P13010 732 aaKnown RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 CASP4P49662 377 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 BTKQ06187 659 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 LSAMPQ13449 338 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 SLC35G1Q2M3R5 365 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 PPP1R21Q6ZMI0 780 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 HIPK4Q8NE63 616 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 JDP2Q8WYK2 163 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 RAD54LQ92698 747 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 CLPTM1LQ96KA5 538 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 MTA3Q9BTC8 594 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 AAASQ9NRG9 546 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 HEY2Q9UBP5 337 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 COG5Q9UP83 839 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 SPDYE16A6NNV3 312 aaPredicted RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 GSC2O15499 205 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 SPOPO43791 374 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 RNASEH1O60930 286 aaKnown RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 PHLDB2Q86SQ0 1253 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 MAP7D3Q8IWC1 876 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 LARSQ9P2J5 1176 aaKnown RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 SERPINA10Q9UK55 444 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 ABCB11O95342 1321 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 SLC37A4O43826 429 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 COILP38432 576 aaPredicted RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 ADCY8P40145 1251 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 KRT17Q04695 432 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 MTM1Q13496 603 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 PPP2R5EQ16537 467 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 PHLDB3Q6NSJ2 640 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 DYNLL2Q96FJ2 89 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 KLF6Q99612 283 aaPredicted RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 MXD3Q9BW11 206 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 CHD4Q14839 1912 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 GOLGA8RI6L899 631 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 TMCC1O94876 653 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 TTC4O95801 387 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 ESRRAP11474 423 aaPredicted RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 VCAM1P19320 739 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 TNNI2P48788 182 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 MRPS9P82933 396 aaKnown RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 CBX3Q13185 183 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 TNFAIP8L3Q5GJ75 292 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 NSMFQ6X4W1 530 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 CLNKQ7Z7G1 428 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 ST13P4Q8IZP2 240 aaPredicted RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 PROM2Q8N271 834 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 ANKRD35Q8N283 1001 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 ARHGAP18Q8N392 663 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 TMEM109Q9BVC6 243 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 CLEC11AQ9Y240 323 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 KAT6BQ8WYB5 2073 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 BTNL10A8MVZ5 291 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 HAUS5O94927 633 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 HARSP12081 509 aaKnown RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 PGM1P36871 562 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 CASP5P51878 434 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 MARK2Q7KZI7 788 aaKnown RBP7.94□□□□□ -1.14
CPSF6-202ENST00000435070 OTOAQ7RTW8 1153 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 TTC7BQ86TV6 843 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 SCFD1Q8WVM8 642 aa7.94□□□□□ -1.14
CPSF6-202ENST00000435070 PALM3A6NDB9 673 aaPredicted RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 CLDN3O15551 220 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 ITGA8P53708 1063 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 DRG2P55039 364 aaKnown RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 AP1B1Q10567 949 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 SPARCL1Q14515 664 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 PLEKHG4Q58EX7 1191 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 UBL4BQ8N7F7 174 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 RFWD2Q8NHY2 731 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 NAT14Q8WUY8 206 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 BCAS3Q9H6U6 928 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 SYNCQ9H7C4 482 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 ARHGEF38Q9NXL2 777 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 MTUS1Q9ULD2 1270 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 KIAA1024Q9UPX6 916 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 RBM47A0AV96 593 aaKnown RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 CCDC22O60826 627 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 COMTP21964 271 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 COG7P83436 770 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 CCDC15Q0P6D6 951 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 SLC1A5Q15758 541 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 TRMT10CQ7L0Y3 403 aaKnown RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 GPBP1Q86WP2 473 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 PRPF31Q8WWY3 499 aaKnown RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 ZNF512BQ96KM6 892 aaPredicted RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 RPA3P35244 121 aaPredicted RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 ACVR2BQ13705 512 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 DRAP1Q14919 205 aaPredicted RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 DNAJC10Q8IXB1 793 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 SMC1BQ8NDV3 1235 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 ART4Q93070 314 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 EBF3Q9H4W6 596 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 MCM9Q9NXL9 1143 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 NINJ2Q9NZG7 142 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 LAD1O00515 517 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 RINLQ6ZS11 566 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 ZNF354CQ86Y25 554 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms