RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 DPY19L2P1Q6NXN4 242 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 OTUD6AQ7L8S5 288 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 TEX13BQ9BXU2 312 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 MLXIPLQ9NP71 852 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 O00370 1275 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 B4GALNT4Q76KP1 1039 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 VSIG10LQ86VR7 867 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 LMBR1Q8WVP7 490 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 RFFLQ8WZ73 363 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 SYN2Q92777 582 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-203ENST00000434376 CABS1Q96KC9 395 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 PWWP2AQ96N64 755 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 GPR88Q9GZN0 384 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 SEL1LQ9UBV2 794 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 ANAPC7Q9UJX3 599 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 CLDN3O15551 220 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 TFAMQ00059 246 aaKnown RBP16.72■□□□□ 0.27
SCARF1-203ENST00000434376 STRN3Q13033 797 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 BMT2Q1RMZ1 405 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 KRT71Q3SY84 523 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 SYCP2LQ5T4T6 812 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.72■□□□□ 0.272e-6■■□□□ 13.2
SCARF1-203ENST00000434376 CNOT8Q9UFF9 292 aaKnown RBP16.72■□□□□ 0.27
SCARF1-203ENST00000434376 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-203ENST00000434376 UMODL1Q5DID0 1318 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 NOP56O00567 594 aaKnown RBP16.71■□□□□ 0.27
SCARF1-203ENST00000434376 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-203ENST00000434376 PDE6CP51160 858 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 JAM2P57087 298 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 C1orf220Q5T0J3 134 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 MSL3Q8N5Y2 521 aaKnown RBP16.71■□□□□ 0.27
SCARF1-203ENST00000434376 ATP6V0A1Q93050 837 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 ACAD9Q9H845 621 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 ZNF214Q9UL59 606 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-203ENST00000434376 GRIN2DO15399 1336 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 INO80B-WBP1J3KQ70 363 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 IRF6O14896 467 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 NR1D1P20393 614 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 KRT76Q01546 638 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 VGLL4Q14135 290 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 CEP120Q8N960 986 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 INO80BQ9C086 356 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-203ENST00000434376 XPNPEP1Q9NQW7 623 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 RAB20Q9NX57 234 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 CYP39A1Q9NYL5 469 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 PCDHB4Q9Y5E5 795 aa16.71■□□□□ 0.27
SCARF1-203ENST00000434376 PFASO15067 1338 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 GGPS1O95749 300 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 LSP1P33241 339 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 ZNF131P52739 623 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 DCAF12L1Q5VU92 463 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 KRT39Q6A163 491 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 CHADLQ6NUI6 762 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 SLC39A4Q6P5W5 647 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 PARD3BQ8TEW8 1205 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 YY1AP1Q9H869 796 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 CYP26B1Q9NR63 512 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 CLEC11AQ9Y240 323 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 DCDC2CA8MYV0 355 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 WEE2P0C1S8 567 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 TNFSF9P41273 254 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 KIRREL3Q8IZU9 778 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 LRRC57Q8N9N7 239 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 ZNF564Q8TBZ8 553 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-203ENST00000434376 MGARPQ8TDB4 240 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 SLC7A3Q8WY07 619 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 MSTO1Q9BUK6 570 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 AS3MTQ9HBK9 375 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 TRPC6Q9Y210 931 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 PSAPP07602 524 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 CD19P15391 556 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 FGFR4P22455 802 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 GNPTABQ3T906 1256 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 FBXL13Q8NEE6 735 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 ASAP3Q8TDY4 903 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 SELENOSQ9BQE4 189 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 RNF181Q9P0P0 153 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 TSKSQ9UJT2 592 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 UTP11Q9Y3A2 253 aaKnown RBP16.7■□□□□ 0.26
SCARF1-203ENST00000434376 SIPA1L1O43166 1804 aa16.7■□□□□ 0.26
SCARF1-203ENST00000434376 ZNF233A6NK53 670 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 SPDYE16A6NNV3 312 aaPredicted RBP16.69■□□□□ 0.26
SCARF1-203ENST00000434376 TBC1D12O60347 775 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 PYGMP11217 842 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 EMC2Q15006 297 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 PPP1R7Q15435 360 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 RHPN2Q8IUC4 686 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 SULF1Q8IWU6 871 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 FBXO16Q8IX29 292 aaPredicted RBP16.69■□□□□ 0.26
SCARF1-203ENST00000434376 EPS8L1Q8TE68 723 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 RNF25Q96BH1 459 aaPredicted RBP16.69■□□□□ 0.26
SCARF1-203ENST00000434376 CYFIP2Q96F07 1278 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 ZNF302Q9NR11 478 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 C1orf112Q9NSG2 853 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 NOVA2Q9UNW9 492 aaKnown RBP16.69■□□□□ 0.26
SCARF1-203ENST00000434376 GOLGA8SH3BPF8 625 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 PIAS1O75925 651 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 CCDC172P0C7W6 258 aa16.69■□□□□ 0.26
SCARF1-203ENST00000434376 TMEM62Q0P6H9 643 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms