RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PBX3P40426 434 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 GRM5P41594 1212 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 KMT5BQ4FZB7 885 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 SEZ6Q53EL9 994 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 SLFN12LQ6IEE8 588 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 NELFCDQ8IXH7 590 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 CEP120Q8N960 986 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 TMEM87AQ8NBN3 555 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 CLP1Q92989 425 aaKnown RBP16.96■□□□□ 0.31
TREX1-201ENST00000433541 ACAP3Q96P50 834 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 FGFBP2Q9BYJ0 223 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 TMEM206Q9H813 350 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 CHD7Q9P2D1 2997 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 SZT2Q5T011 3432 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 EPOPA6NHQ4 379 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 PIGRP01833 764 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 MCL1Q07820 350 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 KCNA1Q09470 495 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 PNOCQ13519 176 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 KCNT2Q6UVM3 1135 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 LRRC55Q6ZSA7 311 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 FAM212AQ96EL1 285 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 GUCD1Q96NT3 240 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 PLVAPQ9BX97 442 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 CWH43Q9H720 699 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 PTPRHQ9HD43 1115 aa16.95■□□□□ 0.3
TREX1-201ENST00000433541 PDCD11Q14690 1871 aaKnown RBP16.95■□□□□ 0.3
TREX1-201ENST00000433541 TISP43B9A030 160 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 ANKRD63C9JTQ0 380 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 EIF3DO15371 548 aaKnown RBP eCLIP16.94■□□□□ 0.3
TREX1-201ENST00000433541 PPP1R37O75864 691 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 SMC2O95347 1197 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 RB1P06400 928 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 PROZP22891 400 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 CA8P35219 290 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 PPM1AP35813 382 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 OR1G1P47890 313 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 AFF1P51825 1210 aaKnown RBP16.94■□□□□ 0.3
TREX1-201ENST00000433541 BCAR1P56945 870 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 KRT17Q04695 432 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 GRIK3Q13003 919 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 PSMD2Q13200 908 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 KYAT1Q16773 422 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 PTPROQ16827 1216 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 GLRA4Q5JXX5 417 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 ARMCX5Q6P1M9 558 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 ZNF280BQ86YH2 543 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 KLHL23Q8NBE8 558 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 GLIS3Q8NEA6 775 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 IKZF4Q9H2S9 585 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 NRDE2Q9H7Z3 1164 aa16.94■□□□□ 0.3
TREX1-201ENST00000433541 ALG13Q9NP73 1137 aaKnown RBP16.94■□□□□ 0.3
TREX1-201ENST00000433541 AGO2Q9UKV8 859 aaKnown RBP16.94■□□□□ 0.3
TREX1-201ENST00000433541 NT5C1B-RDH14C9J2C7 533 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 H3BNC9 293 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 OGTO15294 1046 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 THP07101 528 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 CLTAP09496 248 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 PPP2R3AQ06190 1150 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 DPYDQ12882 1025 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 SNW1Q13573 536 aaKnown RBP16.93■□□□□ 0.3
TREX1-201ENST00000433541 ENGASEQ8NFI3 743 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 PPM1EQ8WY54 764 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 SMARCE1Q969G3 411 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 TMEM169Q96HH4 297 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 TIGD1Q96MW7 591 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 RPF1Q9H9Y2 349 aaKnown RBP16.93■□□□□ 0.3
TREX1-201ENST00000433541 RMND1Q9NWS8 449 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 SPG21Q9NZD8 308 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 DNAJB4Q9UDY4 337 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 PUF60Q9UHX1 559 aaKnown RBP16.93■□□□□ 0.3
TREX1-201ENST00000433541 FAN1Q9Y2M0 1017 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 PRG3Q9Y2Y8 225 aaPredicted RBP16.93■□□□□ 0.3
TREX1-201ENST00000433541 UBE4BO95155 1302 aa16.93■□□□□ 0.3
TREX1-201ENST00000433541 ZMYM2Q9UBW7 1377 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 A0A0B4J269 797 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 CARNS1A5YM72 827 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 C5orf67F2Z3F1 127 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 ABLIM1O14639 778 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 KLRC4O43908 158 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 FGF18O76093 207 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 KIF20AO95235 890 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 CXCL8P10145 99 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 TNFSF9P41273 254 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 SLC39A4Q6P5W5 647 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 HS2ST1Q7LGA3 356 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 MICAL1Q8TDZ2 1067 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 KCNN1Q92952 543 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 P2RX5Q93086 422 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 STRA6Q9BX79 667 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 PCIF1Q9H4Z3 704 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 MIOSQ9NXC5 875 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 ANK1P16157 1881 aa16.92■□□□□ 0.3
TREX1-201ENST00000433541 TRANK1O15050 2925 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 CASTOR2A6NHX0 329 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 DDHD2O94830 711 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 ALDH2P05091 517 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 ITGB1P05556 798 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 LINC00271P0C7V0 271 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 SLC11A1P49279 550 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms