RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SYDE1Q6ZW31 735 aaPredicted RBP7.36□□□□□ -1.23
USP54-206ENST00000433394 USP30Q70CQ3 517 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 RALYLQ86SE5 291 aaKnown RBP7.36□□□□□ -1.23
USP54-206ENST00000433394 SAPCD2Q86UD0 394 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 SH2D3CQ8N5H7 860 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 PARD3BQ8TEW8 1205 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 AJUBAQ96IF1 538 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 CCDC138Q96M89 665 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 PTPN18Q99952 460 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 SLC6A15Q9H2J7 730 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 KCNK12Q9HB15 430 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 ABCF2Q9UG63 623 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 DAAM1Q9Y4D1 1078 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 PCDHA3Q9Y5H8 950 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 C9orf118A6NHY6 69 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 RHPN2P1A8MT19 583 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 ITGA10O75578 1167 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 TOX4O94842 621 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 PLA2G1BP04054 148 aaKnown RBP7.35□□□□□ -1.23
USP54-206ENST00000433394 VSIG10L2P0DP72 767 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 DDCP20711 480 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 CAP1Q01518 475 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 PTH1RQ03431 593 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 FAM26FQ5R3K3 315 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 C10orf62Q5T681 223 aaPredicted RBP7.35□□□□□ -1.23
USP54-206ENST00000433394 C1orf228Q6PIY5 440 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 KRT78Q8N1N4 520 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 OR5M3Q8NGP4 307 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 CASKIN2Q8WXE0 1202 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 HOXB13Q92826 284 aaPredicted RBP7.35□□□□□ -1.23
USP54-206ENST00000433394 PGBD4Q96DM1 585 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 LCORQ96JN0 433 aaPredicted RBP7.35□□□□□ -1.23
USP54-206ENST00000433394 FAM84AQ96KN4 292 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 YTHDC1Q96MU7 727 aaKnown RBP7.35□□□□□ -1.23
USP54-206ENST00000433394 PDCD2LQ9BRP1 358 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 LRFN3Q9BTN0 628 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 EPC1Q9H2F5 836 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 KIAA1586Q9HCI6 787 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 NCDNQ9UBB6 729 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 OGDHLQ9ULD0 1010 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 DMTF1Q9Y222 760 aa7.35□□□□□ -1.23
USP54-206ENST00000433394 CTDP1Q9Y5B0 961 aaPredicted RBP7.35□□□□□ -1.23
USP54-206ENST00000433394 IFRD1O00458 451 aaPredicted RBP7.34□□□□□ -1.23
USP54-206ENST00000433394 FRS3O43559 492 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 TYRP14679 529 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 PI3P19957 117 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 SREBF1P36956 1147 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 MCTP2Q6DN12 878 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 Q6ZVL8 140 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 DPP9Q86TI2 863 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 MYLK4Q86YV6 388 aaPredicted RBP7.34□□□□□ -1.23
USP54-206ENST00000433394 TMEM151BQ8IW70 566 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 TMEFF1Q8IYR6 380 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 SPICE1Q8N0Z3 855 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 SUCLG2Q96I99 432 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 SAMD11Q96NU1 681 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 VRK1Q99986 396 aaPredicted RBP7.34□□□□□ -1.23
USP54-206ENST00000433394 BTBD1Q9H0C5 482 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 BHMT2Q9H2M3 363 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 ZNF287Q9HBT7 754 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 ARFGAP3Q9NP61 516 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 PIH1D1Q9NWS0 290 aaKnown RBP7.34□□□□□ -1.23
USP54-206ENST00000433394 ING3Q9NXR8 418 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 TRPS1Q9UHF7 1281 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 AJAP1Q9UKB5 411 aaPredicted RBP7.34□□□□□ -1.23
USP54-206ENST00000433394 KCTD3Q9Y597 815 aa7.34□□□□□ -1.23
USP54-206ENST00000433394 FARP2O94887 1054 aaPredicted RBP7.33□□□□□ -1.24
USP54-206ENST00000433394 FOSP01100 380 aaPredicted RBP7.33□□□□□ -1.24
USP54-206ENST00000433394 GNAI3P08754 354 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 SETSIPP0DME0 302 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 ZKSCAN1P17029 563 aaPredicted RBP7.33□□□□□ -1.24
USP54-206ENST00000433394 TAL1P17542 331 aaPredicted RBP7.33□□□□□ -1.24
USP54-206ENST00000433394 MALP21145 153 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 NPEPPSP55786 919 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 GNAI1P63096 354 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 ZNF827Q17R98 1081 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 GRAMD1BQ3KR37 738 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 TOGARAM2Q6ZUX3 1019 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 LARP4Q71RC2 724 aaKnown RBP eCLIP7.33□□□□□ -1.24
USP54-206ENST00000433394 MSL3Q8N5Y2 521 aaKnown RBP7.33□□□□□ -1.24
USP54-206ENST00000433394 AOPEPQ8N6M6 819 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 APIPQ96GX9 242 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 SLC39A13Q96H72 371 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 ARPC5LQ9BPX5 153 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 APOL5Q9BWW9 433 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 NAA15Q9BXJ9 866 aaKnown RBP7.33□□□□□ -1.24
USP54-206ENST00000433394 KIAA1683Q9H0B3 1180 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 PLCB1Q9NQ66 1216 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 TAGLN3Q9UI15 199 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 CPA4Q9UI42 421 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 ADAM29Q9UKF5 820 aa7.33□□□□□ -1.24
USP54-206ENST00000433394 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
USP54-206ENST00000433394 SH3D21A4FU49 640 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 C2orf78A6NCI8 922 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 LRRC14BA6NHZ5 514 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 ADCY6O43306 1168 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 MED14OSP0DP75 135 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 MYF5P13349 255 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 SLC7A1P30825 629 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 SLC6A9P48067 706 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms