RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 MAP3K10Q02779 954 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 UBE4AQ14139 1066 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 MTF1Q14872 753 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 Q3ZCU0 254 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 KCTD21Q4G0X4 260 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 TTC39AQ5SRH9 613 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 TMEM63BQ5T3F8 832 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 ERMARDQ5T6L9 678 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 AGBL2Q5U5Z8 902 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 AGMOQ6ZNB7 445 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 NET1Q7Z628 596 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-202ENST00000432954 PJA1Q8NG27 643 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 RIN3Q8TB24 985 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 SGF29Q96ES7 293 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 CEP170P1Q96L14 293 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 NLRP4Q96MN2 994 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 C8orf33Q9H7E9 229 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-202ENST00000432954 BRD9Q9H8M2 597 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 SP140LQ9H930 580 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 SLC7A8Q9UHI5 535 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 DOLKQ9UPQ8 538 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.59□□□□□ -0.55
CCDC171-202ENST00000432954 TUBGCP6Q96RT7 1819 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 CROCC2H7BZ55 1655 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 GOLGA8QA0A0J9YX86 632 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 GOLGA8OA6NCC3 632 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 GOLGA8NF8WBI6 632 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 TRDMT1O14717 391 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 SLC22A1O15245 554 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 PTPN9P43378 593 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 HNRNPMP52272 730 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 PKN2Q16513 984 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 TXNRD1Q16881 649 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 BRDTQ58F21 947 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 PAPD7Q5XG87 772 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 ANO1Q5XXA6 986 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 DCDC5Q6ZRR9 648 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 RTL10Q7L3V2 364 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 TICAM1Q8IUC6 712 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 AGGF1Q8N302 714 aaeCLIP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 CERKQ8TCT0 537 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 LRRC8CQ8TDW0 803 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 RBM18Q96H35 190 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 COG8Q96MW5 612 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 TMEM237Q96Q45 408 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 DDX23Q9BUQ8 820 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 ATP13A3Q9H7F0 1226 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 POLD4Q9HCU8 107 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 APOBEC2Q9Y235 224 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 SETD1AO15047 1707 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 MIF4GDA9UHW6 222 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 H7C1D1 291 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 TLR3O15455 904 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 ST8SIA5O15466 376 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 PLEKHA8P1O95397 391 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 UBTFL6P0CB48 400 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 PDCP20941 246 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 SSTP61278 116 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 NOP14P78316 857 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 GRM2Q14416 872 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 CWF19L2Q2TBE0 894 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 LDLRAD1Q5T700 205 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 CCDC129Q6ZRS4 1044 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 RAPH1Q70E73 1250 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 CATSPER4Q7RTX7 472 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 ZNF572Q7Z3I7 529 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 MRPS27Q92552 414 aaKnown RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 TTC9Q92623 222 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 SERINC2Q96SA4 455 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 ZNF184Q99676 751 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 RNF41Q9H4P4 317 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 DENND2DQ9H6A0 471 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-202ENST00000432954 PGAP2Q9UHJ9 254 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 DPP7Q9UHL4 492 aa11.58□□□□□ -0.56
CCDC171-202ENST00000432954 F8W810 466 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 XPO1O14980 1071 aaKnown RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 ECDO95905 644 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 FUCA1P04066 466 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 ZCCHC18P0CG32 403 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 IGHMBP2P38935 993 aaKnown RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 LETM2Q2VYF4 491 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 SLC10A5Q5PT55 438 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 GPR141Q7Z602 305 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 ADAMTSL2Q86TH1 951 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 CCDC116Q8IYX3 515 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 KIF2BQ8N4N8 673 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 PMEPA1Q969W9 287 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 GMLQ99445 158 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 RNF38Q9H0F5 515 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 RAD21L1Q9H4I0 556 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 SIAEQ9HAT2 523 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 NTN4Q9HB63 628 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 TRNAU1APQ9NX07 287 aaKnown RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 AP3M1Q9Y2T2 418 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 GPSM3Q9Y4H4 160 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 POLR1CO15160 346 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 EPN2O95208 641 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 OAS1P00973 400 aaKnown RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 NUBP1P53384 320 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 GNG2P59768 71 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms