RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 CAVIN1Q6NZI2 390 aaKnown RBP16.52■□□□□ 0.24
CDRT15-202ENST00000431716 ARMCX5Q6P1M9 558 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 GLB1LQ6UWU2 654 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 THNSL1Q8IYQ7 743 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 SMYD4Q8IYR2 804 aaPredicted RBP16.52■□□□□ 0.24
CDRT15-202ENST00000431716 ABI1Q8IZP0 508 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 MLKLQ8NB16 471 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 MAFAQ8NHW3 353 aaPredicted RBP16.52■□□□□ 0.24
CDRT15-202ENST00000431716 TMEM174Q8WUU8 243 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 ARNTL2Q8WYA1 636 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 DHTKD1Q96HY7 919 aaPredicted RBP16.52■□□□□ 0.24
CDRT15-202ENST00000431716 ACAP3Q96P50 834 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 YME1L1Q96TA2 773 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 IKZF4Q9H2S9 585 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 KCTD10Q9H3F6 313 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 NXF3Q9H4D5 531 aaKnown RBP16.52■□□□□ 0.24
CDRT15-202ENST00000431716 AGPAT3Q9NRZ7 376 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 TMEM63CQ9P1W3 806 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 AGO2Q9UKV8 859 aaKnown RBP16.52■□□□□ 0.24
CDRT15-202ENST00000431716 HES2Q9Y543 173 aa16.52■□□□□ 0.24
CDRT15-202ENST00000431716 LCHNA4D1U4 455 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 TISP43B9A030 160 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 PSMA7O14818 248 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 CALUO43852 315 aaPredicted RBP16.51■□□□□ 0.23
CDRT15-202ENST00000431716 LDHAP00338 332 aaKnown RBP16.51■□□□□ 0.23
CDRT15-202ENST00000431716 HARSP12081 509 aaKnown RBP16.51■□□□□ 0.23
CDRT15-202ENST00000431716 YARSP54577 528 aaKnown RBP16.51■□□□□ 0.23
CDRT15-202ENST00000431716 HTRA4P83105 476 aaPredicted RBP16.51■□□□□ 0.23
CDRT15-202ENST00000431716 POU5F1Q01860 360 aaKnown RBP16.51■□□□□ 0.23
CDRT15-202ENST00000431716 MYBPC2Q14324 1141 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 AGMOQ6ZNB7 445 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 C12orf56Q8IXR9 622 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 LPPQ93052 612 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 APOL6Q9BWW8 343 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 HAPLN2Q9GZV7 340 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 TMEM117Q9H0C3 514 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 RSAD1Q9HA92 442 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 KIAA1586Q9HCI6 787 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 TOPORSQ9NS56 1045 aaPredicted RBP16.51■□□□□ 0.23
CDRT15-202ENST00000431716 SNTG2Q9NY99 539 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 PARP2Q9UGN5 583 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 TRAF3IP3Q9Y228 551 aa16.51■□□□□ 0.23
CDRT15-202ENST00000431716 PPP1R3GB7ZBB8 358 aa16.5■□□□□ 0.23
CDRT15-202ENST00000431716 AKAP5P24588 427 aa16.5■□□□□ 0.23
CDRT15-202ENST00000431716 NLRP12P59046 1061 aa16.5■□□□□ 0.23
CDRT15-202ENST00000431716 CENPPQ6IPU0 288 aa16.5■□□□□ 0.23
CDRT15-202ENST00000431716 SASS6Q6UVJ0 657 aa16.5■□□□□ 0.23
CDRT15-202ENST00000431716 SLC9A9Q8IVB4 645 aa16.5■□□□□ 0.23
CDRT15-202ENST00000431716 ZNF689Q96CS4 500 aaPredicted RBP16.5■□□□□ 0.23
CDRT15-202ENST00000431716 CBWD1Q9BRT8 395 aa16.5■□□□□ 0.23
CDRT15-202ENST00000431716 PLEKHA5Q9HAU0 1116 aa16.5■□□□□ 0.23
CDRT15-202ENST00000431716 KANSL3Q9P2N6 904 aa16.5■□□□□ 0.23
CDRT15-202ENST00000431716 PTPRSQ13332 1948 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 MEIS3P2A8K0S8 358 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 INPPL1O15357 1258 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 EXTL3O43909 919 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 FAM189A1O60320 539 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 OFD1O75665 1012 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 RECQL4O94761 1208 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 FGFR1P11362 822 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 RPL13P26373 211 aaKnown RBP16.49■□□□□ 0.23
CDRT15-202ENST00000431716 OSTNP61366 133 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 NFIL3Q16649 462 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 EDRF1Q3B7T1 1238 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 CT47A1Q5JQC4 288 aaPredicted RBP16.49■□□□□ 0.23
CDRT15-202ENST00000431716 CLLU1OSQ5K130 101 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 FOXR2Q6PJQ5 311 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 CMTR2Q8IYT2 770 aaKnown RBP16.49■□□□□ 0.23
CDRT15-202ENST00000431716 GPD1LQ8N335 351 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 CEP120Q8N960 986 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 XXYLT1Q8NBI6 393 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 URGCPQ8TCY9 931 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 PPM1EQ8WY54 764 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 CASD1Q96PB1 797 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 TGS1Q96RS0 853 aaKnown RBP16.49■□□□□ 0.23
CDRT15-202ENST00000431716 TSG101Q99816 390 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 MRPL9Q9BYD2 267 aaKnown RBP16.49■□□□□ 0.23
CDRT15-202ENST00000431716 RNF19AQ9NV58 838 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 HSPBP1Q9NZL4 362 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 DACH1Q9UI36 760 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 CPSF3Q9UKF6 684 aaKnown RBP16.49■□□□□ 0.23
CDRT15-202ENST00000431716 MTUS1Q9ULD2 1270 aa16.49■□□□□ 0.23
CDRT15-202ENST00000431716 LAMA2P24043 3122 aaKnown RBP16.49■□□□□ 0.23
CDRT15-202ENST00000431716 BICDL2A1A5D9 508 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 ARL5CA6NH57 179 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 TBKBP1A7MCY6 615 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 RFXAPO00287 272 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 CLIC2O15247 247 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 ARHGEF15O94989 841 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 NR3C1P04150 777 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 CD44P16070 742 aaKnown RBP16.48■□□□□ 0.23
CDRT15-202ENST00000431716 CCNE1P24864 410 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 ACOT2P49753 483 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 LRRC63Q05C16 580 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 BTG3Q14201 252 aaPredicted RBP16.48■□□□□ 0.23
CDRT15-202ENST00000431716 ZCWPW2Q504Y3 356 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 NOMO2Q5JPE7 1267 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 CD302Q8IX05 232 aa16.48■□□□□ 0.23
CDRT15-202ENST00000431716 HELQQ8TDG4 1101 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms