RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 TMEM200CA6NKL6 621 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 NEMP1O14524 444 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 AKR1B10O60218 316 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 ZSCAN20P17040 1043 aaPredicted RBP6.52□□□□□ -1.37
PTPN4-204ENST00000431283 ENPP1P22413 925 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 PROZP22891 400 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 DDX6P26196 483 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTPN4-204ENST00000431283 ZEB1P37275 1124 aaPredicted RBP6.52□□□□□ -1.37
PTPN4-204ENST00000431283 CDK17Q00537 523 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 COL10A1Q03692 680 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 PRAMEF14Q5SWL7 426 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 ANKS6Q68DC2 871 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 ARHGEF19Q8IW93 802 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 CMTR2Q8IYT2 770 aaKnown RBP6.52□□□□□ -1.37
PTPN4-204ENST00000431283 BEND2Q8NDZ0 799 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 CPEB3Q8NE35 698 aaKnown RBP6.52□□□□□ -1.37
PTPN4-204ENST00000431283 PHACTR3Q96KR7 559 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 UHRF1Q96T88 793 aaPredicted RBP6.52□□□□□ -1.37
PTPN4-204ENST00000431283 REXO4Q9GZR2 422 aaKnown RBP6.52□□□□□ -1.37
PTPN4-204ENST00000431283 PRDM12Q9H4Q4 367 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 EDARQ9UNE0 448 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 CHST2Q9Y4C5 530 aa6.52□□□□□ -1.37
PTPN4-204ENST00000431283 USP15Q9Y4E8 981 aaPredicted RBP6.52□□□□□ -1.37
PTPN4-204ENST00000431283 MTHFD2P13995 350 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 ZFP36P26651 326 aaKnown RBP6.51□□□□□ -1.37
PTPN4-204ENST00000431283 SOX5P35711 763 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 BMPR1AP36894 532 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 FLT3LGP49771 235 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 PTTG1IPP53801 180 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 GYS2P54840 703 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 PDCD1Q15116 288 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 ERCC6LQ2NKX8 1250 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 BEAN1Q3B7T3 259 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 CT47A1Q5JQC4 288 aaPredicted RBP6.51□□□□□ -1.37
PTPN4-204ENST00000431283 ATXN7L2Q5T6C5 722 aaPredicted RBP6.51□□□□□ -1.37
PTPN4-204ENST00000431283 ARMC6Q6NXE6 501 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 CLRN3Q8NCR9 226 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 RNF181Q9P0P0 153 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 ATP11BQ9Y2G3 1177 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 FPGT-TNNI3KV9GXZ4 949 aa6.51□□□□□ -1.37
PTPN4-204ENST00000431283 ZAR1LA6NP61 321 aa6.5□□□□□ -1.37
PTPN4-204ENST00000431283 SNRPA1P09661 255 aaKnown RBP6.5□□□□□ -1.37
PTPN4-204ENST00000431283 ECHS1P30084 290 aa6.5□□□□□ -1.37
PTPN4-204ENST00000431283 ADSLP30566 484 aaPredicted RBP6.5□□□□□ -1.37
PTPN4-204ENST00000431283 ADRA1BP35368 520 aa6.5□□□□□ -1.37
PTPN4-204ENST00000431283 PER3P56645 1201 aa6.5□□□□□ -1.37
PTPN4-204ENST00000431283 BLOC1S1P78537 153 aa6.5□□□□□ -1.37
PTPN4-204ENST00000431283 SPDYE7PQ495Y7 208 aa6.5□□□□□ -1.37
PTPN4-204ENST00000431283 PDCD4Q53EL6 469 aaKnown RBP6.5□□□□□ -1.37
PTPN4-204ENST00000431283 BTNL9Q6UXG8 535 aa6.5□□□□□ -1.37
PTPN4-204ENST00000431283 SYT12Q8IV01 421 aa6.5□□□□□ -1.37
PTPN4-204ENST00000431283 AUTS2Q8WXX7 1259 aa6.5□□□□□ -1.37
PTPN4-204ENST00000431283 CEP95Q96GE4 821 aa6.5□□□□□ -1.37
PTPN4-204ENST00000431283 UNC119BA6NIH7 251 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 GOLGA8AA7E2F4 631 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 ZNF185O15231 689 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 PJA2O43164 708 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 HKR1P10072 659 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 ID4P47928 161 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 CLRN1P58418 232 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 CCT2P78371 535 aaKnown RBP6.49□□□□□ -1.37
PTPN4-204ENST00000431283 MRPS9P82933 396 aaKnown RBP6.49□□□□□ -1.37
PTPN4-204ENST00000431283 MST1LQ2TV78 715 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 FAM47AQ5JRC9 791 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 RRP12Q5JTH9 1297 aaKnown RBP6.49□□□□□ -1.37
PTPN4-204ENST00000431283 MFSD14BQ5SR56 506 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 Q6YL49 198 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 GPR156Q8NFN8 814 aa6.49□□□□□ -1.37
PTPN4-204ENST00000431283 RIN2Q8WYP3 895 aaPredicted RBP6.49□□□□□ -1.37
PTPN4-204ENST00000431283 BRINP1O60477 761 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 CPEP16870 476 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 CHN2P52757 468 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 RAP2BP61225 183 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 OLFML1Q6UWY5 402 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 UBR7Q8N806 425 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 OR7D4Q8NG98 312 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 FATE1Q969F0 183 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 TEX101Q9BY14 249 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 QRSL1Q9H0R6 528 aaKnown RBP6.48□□□□□ -1.37
PTPN4-204ENST00000431283 CAAP1Q9H8G2 361 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 BCO1Q9HAY6 547 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 MOCS1Q9NZB8 636 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 PTGFRNQ9P2B2 879 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 NOX1Q9Y5S8 564 aa6.48□□□□□ -1.37
PTPN4-204ENST00000431283 ADCY6O43306 1168 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 TGM1P22735 817 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 FAPQ12884 760 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 RESTQ13127 1097 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 MUM1L1Q5H9M0 696 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 ABHD17BQ5VST6 288 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 RNF180Q86T96 592 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 REPS2Q8NFH8 660 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 TGFBRAP1Q8WUH2 860 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 CHAC2Q8WUX2 184 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 COQ10AQ96MF6 247 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 ACE2Q9BYF1 805 aaPredicted RBP6.47□□□□□ -1.37
PTPN4-204ENST00000431283 TESQ9UGI8 421 aaKnown RBP6.47□□□□□ -1.37
PTPN4-204ENST00000431283 MAP3K2Q9Y2U5 619 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 ERCC6Q03468 1493 aa6.47□□□□□ -1.37
PTPN4-204ENST00000431283 PIPSLA2A3N6 862 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms