RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 FEZF2Q8TBJ5 459 aa19.24■□□□□ 0.67
DDR1-235ENST00000428153 ZNF707Q96C28 371 aaPredicted RBP19.24■□□□□ 0.67
DDR1-235ENST00000428153 C8orf76Q96K31 380 aa19.24■□□□□ 0.67
DDR1-235ENST00000428153 RTP3Q9BQQ7 232 aa19.24■□□□□ 0.67
DDR1-235ENST00000428153 ADPGKQ9BRR6 497 aa19.24■□□□□ 0.67
DDR1-235ENST00000428153 NT5C3AQ9H0P0 336 aa19.24■□□□□ 0.67
DDR1-235ENST00000428153 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.24■□□□□ 0.671e-6■■■■□ 23
DDR1-235ENST00000428153 STK24Q9Y6E0 443 aa19.24■□□□□ 0.67
DDR1-235ENST00000428153 PTPRZ1P23471 2315 aaPredicted RBP19.23■□□□□ 0.67
DDR1-235ENST00000428153 ARHGEF35A5YM69 484 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 F8W810 466 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 H0Y858 1186 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 TGM5O43548 720 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 THP07101 528 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 AOC1P19801 751 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 NBL1P41271 181 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 HMGN5P82970 282 aaKnown RBP19.23■□□□□ 0.67
DDR1-235ENST00000428153 ELAVL2Q12926 359 aaKnown RBP19.23■□□□□ 0.67
DDR1-235ENST00000428153 PDXDC1Q6P996 788 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 CDR2LQ86X02 465 aaPredicted RBP19.23■□□□□ 0.67
DDR1-235ENST00000428153 SMG7Q92540 1137 aaKnown RBP19.23■□□□□ 0.67
DDR1-235ENST00000428153 PRKD2Q9BZL6 878 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 PDZD7Q9H5P4 517 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 WNT16Q9UBV4 365 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 ZFP37Q9Y6Q3 630 aaPredicted RBP19.23■□□□□ 0.67
DDR1-235ENST00000428153 DOCK8Q8NF50 2099 aa19.23■□□□□ 0.67
DDR1-235ENST00000428153 GFRA3O60609 400 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 N4BP1O75113 896 aaKnown RBP19.22■□□□□ 0.67
DDR1-235ENST00000428153 RFPL2O75678 378 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 PRKCBP05771 671 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 RBM25P49756 843 aaKnown RBP19.22■□□□□ 0.67
DDR1-235ENST00000428153 EFNA5P52803 228 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 PRPF4BQ13523 1007 aaKnown RBP19.22■□□□□ 0.67
DDR1-235ENST00000428153 DCAF4L1Q3SXM0 396 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 CWF19L1Q69YN2 538 aaKnown RBP19.22■□□□□ 0.67
DDR1-235ENST00000428153 PADI6Q6TGC4 694 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 MAEAQ7L5Y9 396 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 FBXO18Q8NFZ0 1043 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 RIN2Q8WYP3 895 aaPredicted RBP19.22■□□□□ 0.67
DDR1-235ENST00000428153 PIK3R5Q8WYR1 880 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 TTPALQ9BTX7 342 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 CCDC113Q9H0I3 377 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 KLK14Q9P0G3 267 aa19.22■□□□□ 0.67
DDR1-235ENST00000428153 FAM186AA6NE01 2351 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 PTGESO14684 152 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 ZMYND10O75800 440 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 HOXA9P31269 272 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 GBP2P32456 591 aaPredicted RBP19.21■□□□□ 0.67
DDR1-235ENST00000428153 FXR2P51116 673 aaKnown RBP eCLIP19.21■□□□□ 0.673e-6■■■□□ 17.5
DDR1-235ENST00000428153 POTEGQ6S5H5 508 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 RTL10Q7L3V2 364 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 PALB2Q86YC2 1186 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 DEPTORQ8TB45 409 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 KIFAP3Q92845 792 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 PIDD1Q9HB75 910 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 FAM86C1Q9NVL1 165 aa19.21■□□□□ 0.67
DDR1-235ENST00000428153 WDR87Q6ZQQ6 2873 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 A0A087WWV3 80 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 TMEM189-UBE2V1I3L0A0 370 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 RECQL4O94761 1208 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 POU2F2P09086 479 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 HNRNPA1P09651 372 aaKnown RBP eCLIP19.2■□□□□ 0.66
DDR1-235ENST00000428153 NPR3P17342 541 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 FOSBP53539 338 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 PDIA5Q14554 519 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 NAB2Q15742 525 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 RTP2Q5QGT7 225 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 APBB1IPQ7Z5R6 666 aaPredicted RBP19.2■□□□□ 0.66
DDR1-235ENST00000428153 NOSTRINQ8IVI9 506 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 BSNDQ8WZ55 320 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 IFT74Q96LB3 600 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 ZSCAN31Q96LW9 406 aaPredicted RBP19.2■□□□□ 0.66
DDR1-235ENST00000428153 SNTG2Q9NY99 539 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 FBXW11Q9UKB1 542 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 FBXL21Q9UKT6 434 aa19.2■□□□□ 0.66
DDR1-235ENST00000428153 SRFP11831 508 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 LAMP2P13473 410 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 GUCY1B3Q02153 619 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 ZNF174Q15697 407 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 TMEM132AQ24JP5 1023 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 TTC38Q5R3I4 469 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 CCDC105Q8IYK2 499 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 SLC44A3Q8N4M1 653 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 FLCNQ8NFG4 579 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 LNX1Q8TBB1 728 aaPredicted RBP19.19■□□□□ 0.66
DDR1-235ENST00000428153 B3GALT6Q96L58 329 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 MYADMQ96S97 322 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 RAB34Q9BZG1 259 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 SH2B1Q9NRF2 756 aaPredicted RBP19.19■□□□□ 0.66
DDR1-235ENST00000428153 NOL7Q9UMY1 257 aaKnown RBP19.19■□□□□ 0.66
DDR1-235ENST00000428153 PHLPP2Q6ZVD8 1323 aa19.19■□□□□ 0.66
DDR1-235ENST00000428153 TTLL13PA6NNM8 815 aa19.18■□□□□ 0.66
DDR1-235ENST00000428153 ANHXE9PGG2 379 aa19.18■□□□□ 0.66
DDR1-235ENST00000428153 KIF4AO95239 1232 aa19.18■□□□□ 0.66
DDR1-235ENST00000428153 FAM171A1Q5VUB5 890 aa19.18■□□□□ 0.66
DDR1-235ENST00000428153 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.18■□□□□ 0.66
DDR1-235ENST00000428153 CCDC83Q8IWF9 413 aa19.18■□□□□ 0.66
DDR1-235ENST00000428153 SIX5Q8N196 739 aa19.18■□□□□ 0.66
DDR1-235ENST00000428153 UROC1Q96N76 676 aa19.18■□□□□ 0.66
DDR1-235ENST00000428153 CLSTN3Q9BQT9 956 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms