RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 PCDHB7Q9Y5E2 793 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 PVALEFA0A1B0GWK0 134 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 CFAP69A5D8W1 941 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 ATMINO43313 823 aaPredicted RBP10.33□□□□□ -0.76
SNX13-203ENST00000428135 SYF2O95926 243 aaKnown RBP10.33□□□□□ -0.76
SNX13-203ENST00000428135 VTNP04004 478 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 RALAP11233 206 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 MTF1Q14872 753 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 PCSK7Q16549 785 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 SGMS1Q86VZ5 419 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 ZNF507Q8TCN5 953 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 SNX19Q92543 992 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 PBXIP1Q96AQ6 731 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 EGFL8Q99944 293 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 KCNH7Q9NS40 1196 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 FBXO2Q9UK22 296 aaPredicted RBP10.33□□□□□ -0.76
SNX13-203ENST00000428135 PITPNM2Q9BZ72 1349 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 CCDC85CA6NKD9 419 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 SLC30A10Q6XR72 485 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 RABGGTAQ92696 567 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 SDCCAG3Q96C92 435 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 SPZ1Q9BXG8 430 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 GPRC5CQ9NQ84 441 aa10.33□□□□□ -0.76
SNX13-203ENST00000428135 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.33□□□□□ -0.76
SNX13-203ENST00000428135 C3P01024 1663 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 FRMD3A2A2Y4 597 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 PAMP19021 973 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 ANTXR2P58335 489 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 DGKDQ16760 1214 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 NAALADL2Q58DX5 795 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 PID1Q7Z2X4 250 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 ANKMY2Q8IV38 441 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 CCDC33Q8N5R6 958 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 ABCB6Q9NP58 842 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
SNX13-203ENST00000428135 TRIM17Q9Y577 477 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 PCDHAC2Q9Y5I4 1007 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 MYMKA6NI61 221 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 HSPA4LO95757 839 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 TTC4O95801 387 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 SERPIND1P05546 499 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 RFC1P35251 1148 aaPredicted RBP10.32□□□□□ -0.76
SNX13-203ENST00000428135 KLK7P49862 253 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 BCAR1P56945 870 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 EXOSC10Q01780 885 aaKnown RBP10.32□□□□□ -0.76
SNX13-203ENST00000428135 ZNF235Q14590 738 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 BZW1Q7L1Q6 419 aaKnown RBP10.32□□□□□ -0.76
SNX13-203ENST00000428135 RASGRP2Q7LDG7 609 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 RASSF3Q86WH2 238 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 PROM2Q8N271 834 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 ZNF560Q96MR9 790 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 PHF20Q9BVI0 1012 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 ABI2Q9NYB9 513 aaPredicted RBP10.32□□□□□ -0.76
SNX13-203ENST00000428135 FCGRTP55899 365 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 NCOA4Q13772 614 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 CCDC38Q502W7 563 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 FAM47EQ6ZV65 393 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 CPB2Q96IY4 423 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 YIPF2Q9BWQ6 316 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 NYAP2Q9P242 653 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 A0A0G2JND7 137 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 SUN1O94901 812 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 ETFBP38117 255 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 FBXW4P57775 412 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 PRAMEP78395 509 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 ART3Q13508 389 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 ATF7IP2Q5U623 682 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 ZNF513Q8N8E2 541 aaPredicted RBP10.32□□□□□ -0.76
SNX13-203ENST00000428135 ACSF2Q96CM8 615 aaPredicted RBP10.32□□□□□ -0.76
SNX13-203ENST00000428135 KATNAL1Q9BW62 490 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 TUFT1Q9NNX1 390 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 KIZQ2M2Z5 673 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 IL31Q6EBC2 164 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 GJB7Q6PEY0 223 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 TRMT10CQ7L0Y3 403 aaKnown RBP10.32□□□□□ -0.76
SNX13-203ENST00000428135 DPF2Q92785 391 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
SNX13-203ENST00000428135 RBM41Q96IZ5 413 aaKnown RBP10.32□□□□□ -0.76
SNX13-203ENST00000428135 PLAAQ9Y263 795 aa10.32□□□□□ -0.76
SNX13-203ENST00000428135 CYP2C8P10632 490 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 SESN2P58004 480 aaPredicted RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 TAF1BQ53T94 588 aaPredicted RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 METTL16Q86W50 562 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 PABPC5Q96DU9 382 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 MXRA8Q9BRK3 442 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 TARS2Q9BW92 718 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 MUC3BQ9H195 1237 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 ALG13Q9NP73 1137 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 MRPL42Q9Y6G3 142 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 USP27XA6NNY8 438 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 ZNF286BP0CG31 522 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 DNAJB2P25686 324 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 GTF2A2P52657 109 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 ROR1Q01973 937 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 LBRQ14739 615 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 SNRNP35Q16560 246 aaKnown RBP10.31□□□□□ -0.76
SNX13-203ENST00000428135 SMTNL2Q2TAL5 461 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 COBLL1Q53SF7 1204 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 PPP1R2P3Q6NXS1 205 aa10.31□□□□□ -0.76
SNX13-203ENST00000428135 KCNV1Q6PIU1 500 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms