RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 NMT1P30419 496 aaKnown RBP18.3■□□□□ 0.52
VRK2-204ENST00000428021 GRM5P41594 1212 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 ME1P48163 572 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 NRIP1P48552 1158 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 DLX2Q07687 328 aaPredicted RBP18.3■□□□□ 0.52
VRK2-204ENST00000428021 ADAM15Q13444 863 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 NAB2Q15742 525 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 RESP18Q5W5W9 173 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 TMC7Q7Z402 723 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 APBB1IPQ7Z5R6 666 aaPredicted RBP18.3■□□□□ 0.52
VRK2-204ENST00000428021 ZBTB33Q86T24 672 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 RBM23Q86U06 439 aaKnown RBP18.3■□□□□ 0.52
VRK2-204ENST00000428021 VPS52Q8N1B4 723 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 HAPLN2Q9GZV7 340 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 ZBP1Q9H171 429 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 TLE6Q9H808 572 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 ENTPD7Q9NQZ7 604 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 CLDND1Q9NY35 253 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 TBX20Q9UMR3 447 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 PRG3Q9Y2Y8 225 aaPredicted RBP18.3■□□□□ 0.52
VRK2-204ENST00000428021 F8W810 466 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 K7ENM7 598 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 SCP2P22307 547 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 OR1G1P47890 313 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 GTF2BQ00403 316 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 AAK1Q2M2I8 961 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 LEXMQ3ZCV2 418 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 ALKAL1Q6UXT8 129 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 SFR1Q86XK3 245 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 FAM178BQ8IXR5 827 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 EFHBQ8N7U6 833 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 MRPL43Q8N983 215 aaKnown RBP18.29■□□□□ 0.52
VRK2-204ENST00000428021 LEO1Q8WVC0 666 aaPredicted RBP18.29■□□□□ 0.52
VRK2-204ENST00000428021 STAMQ92783 540 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 PPP2R3CQ969Q6 453 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 RPS6KC1Q96S38 1066 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 TCHPQ9BT92 498 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 COL25A1Q9BXS0 654 aaPredicted RBP18.29■□□□□ 0.52
VRK2-204ENST00000428021 ST6GALNAC4Q9H4F1 302 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 KBTBD4Q9NVX7 518 aa18.29■□□□□ 0.52
VRK2-204ENST00000428021 TCF20Q9UGU0 1960 aaKnown RBP18.29■□□□□ 0.52
VRK2-204ENST00000428021 FRMD3A2A2Y4 597 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 C2orf71A6NGG8 1288 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 H3BQ06 376 aaPredicted RBP18.28■□□□□ 0.52
VRK2-204ENST00000428021 MEFVO15553 781 aaPredicted RBP18.28■□□□□ 0.52
VRK2-204ENST00000428021 GLP2RO95838 553 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 PIGRP01833 764 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 CTSAP10619 480 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 OSTNP61366 133 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 MCL1Q07820 350 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 DUSP6Q16828 381 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 ZC2HC1CQ53FD0 456 aaPredicted RBP18.28■□□□□ 0.52
VRK2-204ENST00000428021 XKR4Q5GH76 650 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 ZNF720Q7Z2F6 126 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 VN1R2Q8NFZ6 395 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.28■□□□□ 0.52
VRK2-204ENST00000428021 AUTS2Q8WXX7 1259 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 DHX58Q96C10 678 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 PAAF1Q9BRP4 392 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 STRA6Q9BX79 667 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 CUEDC2Q9H467 287 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 CACNG4Q9UBN1 327 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 TTC28Q96AY4 2481 aa18.28■□□□□ 0.52
VRK2-204ENST00000428021 CUL9Q8IWT3 2517 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 POLR2DO15514 142 aaKnown RBP18.27■□□□□ 0.52
VRK2-204ENST00000428021 TBX10O75333 385 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 PPP1R37O75864 691 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 CXCL14O95715 111 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 THP07101 528 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 HARSP12081 509 aaKnown RBP18.27■□□□□ 0.52
VRK2-204ENST00000428021 GAP43P17677 238 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 KRT85P78386 507 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 RBM10P98175 930 aaKnown RBP18.27■□□□□ 0.52
VRK2-204ENST00000428021 TUSC3Q13454 348 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 KCNC3Q14003 757 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 SMC1AQ14683 1233 aaKnown RBP18.27■□□□□ 0.52
VRK2-204ENST00000428021 NOLC1Q14978 699 aaKnown RBP eCLIP18.27■□□□□ 0.52
VRK2-204ENST00000428021 SLC39A4Q6P5W5 647 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 EP400NLQ6ZTU2 488 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 TAS1R1Q7RTX1 841 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 MAP4K3Q8IVH8 894 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 RNF168Q8IYW5 571 aaPredicted RBP18.27■□□□□ 0.52
VRK2-204ENST00000428021 IQUBQ8NA54 791 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 RABGGTAQ92696 567 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 PPP1R10Q96QC0 940 aaKnown RBP18.27■□□□□ 0.52
VRK2-204ENST00000428021 CCDC94Q9BW85 323 aaPredicted RBP18.27■□□□□ 0.52
VRK2-204ENST00000428021 TNMDQ9H2S6 317 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 ANKFY1Q9P2R3 1169 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 SEL1LQ9UBV2 794 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 IRAK3Q9Y616 596 aa18.27■□□□□ 0.52
VRK2-204ENST00000428021 CITO14578 2027 aa18.27■□□□□ 0.51
VRK2-204ENST00000428021 CLDN3O15551 220 aa18.26■□□□□ 0.51
VRK2-204ENST00000428021 LILRB3O75022 631 aa18.26■□□□□ 0.51
VRK2-204ENST00000428021 SEZ6Q53EL9 994 aa18.26■□□□□ 0.51
VRK2-204ENST00000428021 BICD1Q96G01 975 aa18.26■□□□□ 0.51
VRK2-204ENST00000428021 SPATA32Q96LK8 384 aa18.26■□□□□ 0.51
VRK2-204ENST00000428021 ACAP3Q96P50 834 aa18.26■□□□□ 0.51
VRK2-204ENST00000428021 CDCA3Q99618 268 aaPredicted RBP18.26■□□□□ 0.51
VRK2-204ENST00000428021 COLEC11Q9BWP8 271 aa18.26■□□□□ 0.51
VRK2-204ENST00000428021 PANK4Q9NVE7 773 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms