RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 KLHL10Q6JEL2 608 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 RBM43Q6ZSC3 357 aaKnown RBP16.51■□□□□ 0.23
VARS2-203ENST00000428017 CRIPAKQ8N1N5 446 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 GPD1LQ8N335 351 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 CEP120Q8N960 986 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 SAAL1Q96ER3 474 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 FAM213AQ9BRX8 229 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 HAPLN2Q9GZV7 340 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 KCTD10Q9H3F6 313 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 RPF1Q9H9Y2 349 aaKnown RBP16.51■□□□□ 0.23
VARS2-203ENST00000428017 KIAA1586Q9HCI6 787 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 HSPBP1Q9NZL4 362 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 KLK14Q9P0G3 267 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 KANSL3Q9P2N6 904 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 PCDHA11Q9Y5I1 949 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 BICDL2A1A5D9 508 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 MEIS3P2A8K0S8 358 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 EXTL3O43909 919 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 EXOC3O60645 756 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 BMP6P22004 513 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 RPL13P26373 211 aaKnown RBP16.5■□□□□ 0.23
VARS2-203ENST00000428017 MLH1P40692 756 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 ACOT2P49753 483 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 GATMP50440 423 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 RABGGTBP53611 331 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 RNASELQ05823 741 aaKnown RBP16.5■□□□□ 0.23
VARS2-203ENST00000428017 PPP2R3AQ06190 1150 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 NOMO2Q5JPE7 1267 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 CLLU1OSQ5K130 101 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 FAM109BQ6ICB4 259 aaPredicted RBP16.5■□□□□ 0.23
VARS2-203ENST00000428017 C12orf56Q8IXR9 622 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 CMTR2Q8IYT2 770 aaKnown RBP16.5■□□□□ 0.23
VARS2-203ENST00000428017 LRRC43Q8N309 656 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 XXYLT1Q8NBI6 393 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 P2RX5Q93086 422 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 GAD1Q99259 594 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 CTNND2Q9UQB3 1225 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 TRAF3IP3Q9Y228 551 aa16.5■□□□□ 0.23
VARS2-203ENST00000428017 GOLGA8IPA6NC78 632 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 ARL5CA6NH57 179 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 GOLGA8JA6NMD2 632 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 OFD1O75665 1012 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 NR3C1P04150 777 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 HTRA4P83105 476 aaPredicted RBP16.49■□□□□ 0.23
VARS2-203ENST00000428017 SMAD3P84022 425 aaKnown RBP16.49■□□□□ 0.23
VARS2-203ENST00000428017 LRRC63Q05C16 580 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 PAK1Q13153 545 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 SPOUT1Q5T280 376 aaKnown RBP16.49■□□□□ 0.23
VARS2-203ENST00000428017 CENPPQ6IPU0 288 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 FIBCD1Q8N539 461 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 NELFBQ8WX92 580 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 ZFP42Q96MM3 310 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 CASD1Q96PB1 797 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 FAM193BQ96PV7 902 aaPredicted RBP16.49■□□□□ 0.23
VARS2-203ENST00000428017 SEMA6BQ9H3T3 888 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 PLEKHA5Q9HAU0 1116 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 ANO10Q9NW15 660 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 CPSF3Q9UKF6 684 aaKnown RBP16.49■□□□□ 0.23
VARS2-203ENST00000428017 FRMD4BQ9Y2L6 1034 aa16.49■□□□□ 0.23
VARS2-203ENST00000428017 ZNF233A6NK53 670 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 PPP1R3GB7ZBB8 358 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 POMCP01189 267 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 CXCL8P10145 99 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 CD44P16070 742 aaKnown RBP16.48■□□□□ 0.23
VARS2-203ENST00000428017 NR2F2P24468 414 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 CCNE1P24864 410 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 TNFSF9P41273 254 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 POU5F1Q01860 360 aaKnown RBP16.48■□□□□ 0.23
VARS2-203ENST00000428017 MYBPC2Q14324 1141 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 STX1AQ16623 288 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 EDRF1Q3B7T1 1238 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 DPCR1Q3MIW9 517 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 LRIT3Q3SXY7 679 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 ZBTB41Q5SVQ8 909 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 CD302Q8IX05 232 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 TMEM192Q8IY95 271 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 ZNF689Q96CS4 500 aaPredicted RBP16.48■□□□□ 0.23
VARS2-203ENST00000428017 PBX4Q9BYU1 374 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 RNF19AQ9NV58 838 aa16.48■□□□□ 0.23
VARS2-203ENST00000428017 RBAKQ9NYW8 714 aaPredicted RBP16.48■□□□□ 0.23
VARS2-203ENST00000428017 MICAL3Q7RTP6 2002 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 CETN3O15182 167 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 TNRC18O15417 2968 aaPredicted RBP16.47■□□□□ 0.23
VARS2-203ENST00000428017 FAM189A1O60320 539 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 IL18RAPO95256 599 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 SCNN1GP51170 649 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 GRIK3Q13003 919 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 ADAM9Q13443 819 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 ENOX2Q16206 610 aaKnown RBP16.47■□□□□ 0.23
VARS2-203ENST00000428017 SNRNP35Q16560 246 aaKnown RBP16.47■□□□□ 0.23
VARS2-203ENST00000428017 NFIL3Q16649 462 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 CEP135Q66GS9 1140 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 SLC9A9Q8IVB4 645 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 RDH13Q8NBN7 331 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 SNX27Q96L92 541 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 TBC1D13Q9NVG8 400 aa16.47■□□□□ 0.23
VARS2-203ENST00000428017 THP07101 528 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 CA3P07451 260 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 CCDC192P0DO97 292 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms