RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 TMEM87AQ8NBN3 555 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 CCDC34Q96HJ3 373 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 ACCSQ96QU6 501 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 FGFBP2Q9BYJ0 223 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 GBP3Q9H0R5 595 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 LMAN2LQ9H0V9 348 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 NRDE2Q9H7Z3 1164 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 PLAGL2Q9UPG8 496 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 EXOC7Q9UPT5 735 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 MTCH2Q9Y6C9 303 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 ITGB1P05556 798 aa27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 PBX3P40426 434 aa27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 ALDH7A1P49419 539 aaKnown RBP27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 YARSP54577 528 aaKnown RBP27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 BCAR1P56945 870 aa27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 EHHADHQ08426 723 aa27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 GRIK3Q13003 919 aa27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 SLC39A4Q6P5W5 647 aa27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 ZNF280BQ86YH2 543 aa27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 FMR1NBQ8N0W7 255 aaPredicted RBP27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 GSTCDQ8NEC7 633 aa27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 FAM193BQ96PV7 902 aaPredicted RBP27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 TOPORSQ9NS56 1045 aaPredicted RBP27.5■■□□□ 1.99
HERPUD2-205ENST00000427455 PLXNA4Q9HCM2 1894 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 GRM6O15303 877 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 B4GALT3O60512 393 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 FGF18O76093 207 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 DDHD2O94830 711 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 SLC34A2O95436 690 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 OSTNP61366 133 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 FAM160A1Q05DH4 1040 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 HPS3Q969F9 1004 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 MRPL38Q96DV4 380 aaKnown RBP27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 TMEM175Q9BSA9 504 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 HAPLN2Q9GZV7 340 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 ALG13Q9NP73 1137 aaKnown RBP27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 MIOSQ9NXC5 875 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 DNAJB4Q9UDY4 337 aa27.49■■□□□ 1.99
HERPUD2-205ENST00000427455 EIF3DO15371 548 aaKnown RBP eCLIP27.48■■□□□ 1.99
HERPUD2-205ENST00000427455 UBE3AQ05086 875 aa27.48■■□□□ 1.99
HERPUD2-205ENST00000427455 DSC1Q08554 894 aa27.48■■□□□ 1.99
HERPUD2-205ENST00000427455 KCNA1Q09470 495 aa27.48■■□□□ 1.99
HERPUD2-205ENST00000427455 KANK3Q6NY19 840 aa27.48■■□□□ 1.99
HERPUD2-205ENST00000427455 SLC39A11Q8N1S5 342 aa27.48■■□□□ 1.99
HERPUD2-205ENST00000427455 SPG21Q9NZD8 308 aa27.48■■□□□ 1.99
HERPUD2-205ENST00000427455 PRRC2BQ5JSZ5 2229 aaKnown RBP27.48■■□□□ 1.99
HERPUD2-205ENST00000427455 A0A0B4J269 797 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 PTGESO14684 152 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 GALTP07902 379 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 PLCB3Q01970 1234 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 SNW1Q13573 536 aaKnown RBP27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 KYAT1Q16773 422 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 SLFN12LQ6IEE8 588 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 GLIS3Q8NEA6 775 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 ENGASEQ8NFI3 743 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 MAFAQ8NHW3 353 aaPredicted RBP27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 SPPL3Q8TCT6 385 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 ACAP3Q96P50 834 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 TMEM206Q9H813 350 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 EXOC1Q9NV70 894 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 STYXL1Q9Y6J8 313 aa27.47■■□□□ 1.99
HERPUD2-205ENST00000427455 UBE4BO95155 1302 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 ANKRD63C9JTQ0 380 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 OGTO15294 1046 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 KLRC4O43908 158 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 PRPF6O94906 941 aaKnown RBP27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 SLC11A1P49279 550 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 COLGALT2Q8IYK4 626 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 SYCP3Q8IZU3 236 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 POF1BQ8WVV4 589 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 SNX27Q96L92 541 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 MSTO1Q9BUK6 570 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 LZTS1Q9Y250 596 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 CITO14578 2027 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 COL6A3P12111 3177 aa27.46■■□□□ 1.99
HERPUD2-205ENST00000427455 TISP43B9A030 160 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 THP07101 528 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 CLTAP09496 248 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 PRR29P0C7W0 189 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 KRT17Q04695 432 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 TIGD5Q53EQ6 642 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 EPM2AIP1Q7L775 607 aaPredicted RBP27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 MICALL1Q8N3F8 863 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 TMEM169Q96HH4 297 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 IKZF4Q9H2S9 585 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 EYSQ5T1H1 3165 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 ATG2AQ2TAZ0 1938 aa27.45■■□□□ 1.98
HERPUD2-205ENST00000427455 NT5C1B-RDH14C9J2C7 533 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 FAM189A1O60320 539 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 GADD45BO75293 160 aaPredicted RBP27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 NR1I2O75469 434 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 DNAJB1P25685 340 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 DPYDQ12882 1025 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 POSTNQ15063 836 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 KMT5BQ4FZB7 885 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 SEZ6Q53EL9 994 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 XKR4Q5GH76 650 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 ALKAL1Q6UXT8 129 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 TMEM173Q86WV6 379 aaPredicted RBP27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 IGSF21Q96ID5 467 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms