RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ADAM30Q9UKF2 790 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 RALAP11233 206 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 GTF2H3Q13889 308 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 DNAJC10Q8IXB1 793 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 MORC2Q9Y6X9 1032 aaPredicted RBP15.22■□□□□ 0.03
PTPN13-203ENST00000427191 GNA15P30679 374 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 TMEM179Q6ZVK1 233 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 ZNF280CQ8ND82 737 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 ATL2Q8NHH9 583 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 WDR35Q9P2L0 1181 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 PSMC3IPQ9P2W1 217 aaPredicted RBP15.22■□□□□ 0.03
PTPN13-203ENST00000427191 CCDC195A0A1B0GUA6 201 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 TMEM191CA6NGB0 347 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 HIST1H2AGP0C0S8 130 aaPredicted RBP15.22■□□□□ 0.03
PTPN13-203ENST00000427191 ACADSP16219 412 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 HIST1H2ADP20671 130 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 AGBL2Q5U5Z8 902 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 HIST1H2AHQ96KK5 128 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 HIST1H2AJQ99878 128 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 H2AFJQ9BTM1 129 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 PRRG3Q9BZD7 231 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 PAPOLBQ9NRJ5 636 aaKnown RBP15.22■□□□□ 0.03
PTPN13-203ENST00000427191 TMEM270Q6UE05 265 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 SCARA5Q6ZMJ2 495 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 RCOR2Q8IZ40 523 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 MYO3BQ8WXR4 1341 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 CLASP2O75122 1294 aaKnown RBP15.21■□□□□ 0.03
PTPN13-203ENST00000427191 KCNA3P22001 575 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 NMRK1Q9NWW6 199 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 USP15Q9Y4E8 981 aaPredicted RBP15.21■□□□□ 0.03
PTPN13-203ENST00000427191 NUP153P49790 1475 aaKnown RBP15.21■□□□□ 0.03
PTPN13-203ENST00000427191 FDX1P10109 184 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 ZNF235Q14590 738 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 FRMD5Q7Z6J6 570 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 FOXP4Q8IVH2 680 aaPredicted RBP15.21■□□□□ 0.03
PTPN13-203ENST00000427191 AATKQ6ZMQ8 1374 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 STAT3P40763 770 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 CATSPER4Q7RTX7 472 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 NLRP4Q96MN2 994 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 SPATA16Q9BXB7 569 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 MAP3K20Q9NYL2 800 aaKnown RBP15.21■□□□□ 0.03
PTPN13-203ENST00000427191 H0YC42 278 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 SLC16A3O15427 465 aaKnown RBP15.21■□□□□ 0.03
PTPN13-203ENST00000427191 MRPL4Q9BYD3 311 aaKnown RBP15.21■□□□□ 0.03
PTPN13-203ENST00000427191 ITGB1BP2Q9UKP3 347 aa15.21■□□□□ 0.03
PTPN13-203ENST00000427191 KANSL1LA0AUZ9 987 aa15.21■□□□□ 0.02
PTPN13-203ENST00000427191 ILF2Q12905 390 aaKnown RBP15.21■□□□□ 0.02
PTPN13-203ENST00000427191 RHPN2Q8IUC4 686 aa15.21■□□□□ 0.02
PTPN13-203ENST00000427191 PTCH1Q13635 1447 aa15.21■□□□□ 0.02
PTPN13-203ENST00000427191 ZNF839A8K0R7 811 aa15.21■□□□□ 0.02
PTPN13-203ENST00000427191 PER1O15534 1290 aaPredicted RBP15.21■□□□□ 0.02
PTPN13-203ENST00000427191 CYP4F11Q9HBI6 524 aa15.21■□□□□ 0.02
PTPN13-203ENST00000427191 RIC8BQ9NVN3 520 aa15.21■□□□□ 0.02
PTPN13-203ENST00000427191 MTSS1O43312 755 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 AKAP10O43572 662 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 STRNO43815 780 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 ASNSP08243 561 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 CYP27A1Q02318 531 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 PRKCQQ04759 706 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 KNOP1Q1ED39 458 aaKnown RBP15.2■□□□□ 0.02
PTPN13-203ENST00000427191 PALD1Q9ULE6 856 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 VCPP55072 806 aaKnown RBP15.2■□□□□ 0.02
PTPN13-203ENST00000427191 BRD8Q9H0E9 1235 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
PTPN13-203ENST00000427191 KDM5CP41229 1560 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 RESTQ13127 1097 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 KCNV1Q6PIU1 500 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 NDFIP2Q9NV92 336 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 ADGRA3Q8IWK6 1321 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 MAFGO15525 162 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 SRP72O76094 671 aaKnown RBP15.2■□□□□ 0.02
PTPN13-203ENST00000427191 MTMR1Q13613 665 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 FAR2Q96K12 515 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 PIGSQ96S52 555 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 CDC42BPGQ6DT37 1551 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 PPP4R4Q6NUP7 873 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 CROCC2H7BZ55 1655 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 FAM47DPA6NHR8 397 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 CAPZA2P47755 286 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 SCNN1DP51172 638 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 VAMP7P51809 220 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 NCALDP61601 193 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 CYGBQ8WWM9 190 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 TNIP3Q96KP6 325 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 HINFPQ9BQA5 517 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 VPS33BQ9H267 617 aa15.2■□□□□ 0.02
PTPN13-203ENST00000427191 LRRC53A6NM62 1247 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 RGS4P49798 205 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 CDK17Q00537 523 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 LVRNQ6Q4G3 990 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 ROPN1BQ9BZX4 212 aaPredicted RBP15.19■□□□□ 0.02
PTPN13-203ENST00000427191 SLC7A5P2Q9GIP4 190 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 TRABDQ9H4I3 376 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 ROPN1Q9HAT0 212 aaPredicted RBP15.19■□□□□ 0.02
PTPN13-203ENST00000427191 FEM1BQ9UK73 627 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 NCAPD2Q15021 1401 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 TLR2O60603 784 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 NBNO60934 754 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 MARK3P27448 753 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms