RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 NOL4O94818 638 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 ACTN1P12814 892 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 PTPN11Q06124 597 aaPredicted RBP16.39■□□□□ 0.21
GINS3-203ENST00000426538 PTGISQ16647 500 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 C1orf220Q5T0J3 134 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 EEF1DP3Q658K8 133 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 RRAGAQ7L523 313 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 APBB1IPQ7Z5R6 666 aaPredicted RBP16.39■□□□□ 0.21
GINS3-203ENST00000426538 EHBP1Q8NDI1 1231 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 KIAA1524Q8TCG1 905 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 TMEM117Q9H0C3 514 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 TMEM8AQ9HCN3 771 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 NOD1Q9Y239 953 aa16.39■□□□□ 0.21
GINS3-203ENST00000426538 HTTP42858 3142 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 A0A1B0GUA9 196 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 KBTBD13C9JR72 458 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 MCF2P10911 925 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 UCHL3P15374 230 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 FGFR4P22455 802 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 SNX17Q15036 470 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 SURF1Q15526 300 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 KYAT1Q16773 422 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 ZBTB41Q5SVQ8 909 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 TRIM65Q6PJ69 517 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 CYP26C1Q6V0L0 522 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 SERINC5Q86VE9 423 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 TMTC1Q8IUR5 882 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 FAM212AQ96EL1 285 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 CELF4Q9BZC1 486 aaKnown RBP16.38■□□□□ 0.21
GINS3-203ENST00000426538 CDT1Q9H211 546 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 PDZD7Q9H5P4 517 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 PDE11AQ9HCR9 933 aa16.38■□□□□ 0.21
GINS3-203ENST00000426538 CPSF3Q9UKF6 684 aaKnown RBP16.38■□□□□ 0.21
GINS3-203ENST00000426538 GRIN2DO15399 1336 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 FAM189A1O60320 539 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 TNFSF9P41273 254 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 OSTNP61366 133 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 CLDN10P78369 228 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 MRPS6P82932 125 aaKnown RBP16.37■□□□□ 0.21
GINS3-203ENST00000426538 TMEM139Q8IV31 216 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 BRSK2Q8IWQ3 736 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 DNAJC5GQ8N7S2 189 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 SPAG5Q96R06 1193 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 INTS2Q9H0H0 1204 aaKnown RBP16.37■□□□□ 0.21
GINS3-203ENST00000426538 UNC93B1Q9H1C4 597 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 FBXL5Q9UKA1 691 aa16.37■□□□□ 0.21
GINS3-203ENST00000426538 LRRC53A6NM62 1247 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 MYCP01106 439 aaPredicted RBP16.36■□□□□ 0.21
GINS3-203ENST00000426538 AXLP30530 894 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 APBA1Q02410 837 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 NOTUMQ6P988 496 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 SV2AQ7L0J3 742 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 FBXL13Q8NEE6 735 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 GANQ9H2C0 597 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 RPF1Q9H9Y2 349 aaKnown RBP16.36■□□□□ 0.21
GINS3-203ENST00000426538 STARD7Q9NQZ5 370 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 TOPORSQ9NS56 1045 aaPredicted RBP16.36■□□□□ 0.21
GINS3-203ENST00000426538 PLAGL2Q9UPG8 496 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 KCNJ6P48051 423 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 AP3M2P53677 418 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 DCAF4L1Q3SXM0 396 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 EPC2Q52LR7 807 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 PDXDC1Q6P996 788 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 RPAINQ86UA6 219 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 BAP1Q92560 729 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 CGRRF1Q99675 332 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 RNF208Q9H0X6 261 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 RAB20Q9NX57 234 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 APEX2Q9UBZ4 518 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 COQ4Q9Y3A0 265 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 DAAM1Q9Y4D1 1078 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 TRPV2Q9Y5S1 764 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 CDY2AQ9Y6F7 541 aa16.36■□□□□ 0.21
GINS3-203ENST00000426538 A0A1W2PQ45 241 aaPredicted RBP16.35■□□□□ 0.21
GINS3-203ENST00000426538 A0A1W2PQY0 241 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 CLTAP09496 248 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 STAG3L1P0CL83 205 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 FECHP22830 423 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 HOXA11P31270 313 aaPredicted RBP16.35■□□□□ 0.21
GINS3-203ENST00000426538 POU5F1Q01860 360 aaKnown RBP16.35■□□□□ 0.21
GINS3-203ENST00000426538 PTK7Q13308 1070 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 BIRC3Q13489 604 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 RAPGEF1Q13905 1077 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 SFMBT2Q5VUG0 894 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 LMBRD2Q68DH5 695 aaPredicted RBP16.35■□□□□ 0.21
GINS3-203ENST00000426538 SLC27A1Q6PCB7 646 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 CEP120Q8N960 986 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 LMO3Q8TAP4 145 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 TMEM40Q8WWA1 233 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 DEFB118Q96PH6 123 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 SIX2Q9NPC8 291 aa16.35■□□□□ 0.21
GINS3-203ENST00000426538 PAK6Q9NQU5 681 aaPredicted RBP16.35■□□□□ 0.21
GINS3-203ENST00000426538 A0A0U1RQG5 324 aaPredicted RBP16.34■□□□□ 0.21
GINS3-203ENST00000426538 SOWAHDA6NJG2 315 aa16.34■□□□□ 0.21
GINS3-203ENST00000426538 IL18RAPO95256 599 aa16.34■□□□□ 0.21
GINS3-203ENST00000426538 RFX1P22670 979 aa16.34■□□□□ 0.21
GINS3-203ENST00000426538 HNRNPH3P31942 346 aaKnown RBP16.34■□□□□ 0.21
GINS3-203ENST00000426538 THPOP40225 353 aa16.34■□□□□ 0.21
GINS3-203ENST00000426538 MTFR1Q15390 333 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms