RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SPDYE4A6NLX3 237 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 ZNF623O75123 536 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 AXLP30530 894 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 HOXA11P31270 313 aaPredicted RBP14.06□□□□□ -0.16
SGCE-203ENST00000425444 ALDH7A1P49419 539 aaKnown RBP14.06□□□□□ -0.16
SGCE-203ENST00000425444 LMNB2Q03252 620 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 MBTD1Q05BQ5 628 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 POU5F1BQ06416 359 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 PDIA5Q14554 519 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 NOMO2Q5JPE7 1267 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 LARP1BQ659C4 914 aaKnown RBP14.06□□□□□ -0.16
SGCE-203ENST00000425444 PADI6Q6TGC4 694 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 IGSF22Q8N9C0 903 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 FEZF2Q8TBJ5 459 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 CCDC51Q96ER9 411 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 CPB2Q96IY4 423 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 RTKNQ9BST9 563 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 BACH2Q9BYV9 841 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 TRIM6Q9C030 488 aaPredicted RBP14.06□□□□□ -0.16
SGCE-203ENST00000425444 GBP3Q9H0R5 595 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 BHMT2Q9H2M3 363 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 RSAD1Q9HA92 442 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 DDX19AQ9NUU7 478 aaKnown RBP14.06□□□□□ -0.16
SGCE-203ENST00000425444 KIAA1024Q9UPX6 916 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 SIT1Q9Y3P8 196 aa14.06□□□□□ -0.16
SGCE-203ENST00000425444 MEIS3P2A8K0S8 358 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 PP2D1A8MPX8 630 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 PRPHP41219 470 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 BCAR1P56945 870 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 ZRSR1Q15695 479 aaKnown RBP14.05□□□□□ -0.16
SGCE-203ENST00000425444 ECM1Q16610 540 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 TMEM132AQ24JP5 1023 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 UBXN11Q5T124 520 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 IFNLR1Q8IU57 520 aaPredicted RBP14.05□□□□□ -0.16
SGCE-203ENST00000425444 CNNM3Q8NE01 707 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
SGCE-203ENST00000425444 NFKBIZQ9BYH8 718 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 TBC1D13Q9NVG8 400 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 CNTNAP2Q9UHC6 1331 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 IGF2RP11717 2491 aa14.05□□□□□ -0.16
SGCE-203ENST00000425444 DSPP15924 2871 aaKnown RBP14.05□□□□□ -0.16
SGCE-203ENST00000425444 VPS37CA5D8V6 355 aaPredicted RBP14.04□□□□□ -0.16
SGCE-203ENST00000425444 NT5C1B-RDH14C9J2C7 533 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 OFD1O75665 1012 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 ITGA4P13612 1032 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 LIG1P18858 919 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 CYP11B2P19099 503 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 NCLP19338 710 aaKnown RBP14.04□□□□□ -0.16
SGCE-203ENST00000425444 ATP2C1P98194 919 aaPredicted RBP14.04□□□□□ -0.16
SGCE-203ENST00000425444 AGMOQ6ZNB7 445 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 GPR149Q86SP6 731 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 HACE1Q8IYU2 909 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 SLC39A11Q8N1S5 342 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 RSAD2Q8WXG1 361 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 AUTS2Q8WXX7 1259 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 TMEM169Q96HH4 297 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 FAM193BQ96PV7 902 aaPredicted RBP14.04□□□□□ -0.16
SGCE-203ENST00000425444 APOL6Q9BWW8 343 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 EIF2AQ9BY44 585 aaKnown RBP14.04□□□□□ -0.16
SGCE-203ENST00000425444 CSRNP2Q9H175 543 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 C2orf40Q9H1Z8 148 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 UBN1Q9NPG3 1134 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 PRMT7Q9NVM4 692 aaPredicted RBP14.04□□□□□ -0.16
SGCE-203ENST00000425444 DLGAP2Q9P1A6 1054 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 USP18Q9UMW8 372 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 DNM3Q9UQ16 869 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 IPPQ9Y573 584 aa14.04□□□□□ -0.16
SGCE-203ENST00000425444 CARNS1A5YM72 827 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 VWA3AA6NCI4 1184 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 B4GALT5O43286 388 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 ARF4P18085 180 aaPredicted RBP14.03□□□□□ -0.16
SGCE-203ENST00000425444 PDCP20941 246 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 CDC25AP30304 524 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 CUL4AQ13619 759 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 PPP2R5AQ15172 486 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 AMHR2Q16671 573 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 PHLDB3Q6NSJ2 640 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 BRAPQ7Z569 592 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 MRPL10Q7Z7H8 261 aaKnown RBP14.03□□□□□ -0.16
SGCE-203ENST00000425444 VPS52Q8N1B4 723 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 DEPTORQ8TB45 409 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 CDK5RAP3Q96JB5 506 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 IFT74Q96LB3 600 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 PRIMPOLQ96LW4 560 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 NRDE2Q9H7Z3 1164 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 SFXN1Q9H9B4 322 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 HES2Q9Y543 173 aa14.03□□□□□ -0.16
SGCE-203ENST00000425444 GCN1Q92616 2671 aaKnown RBP14.02□□□□□ -0.16
SGCE-203ENST00000425444 C2orf16Q68DN1 1984 aa14.02□□□□□ -0.16
SGCE-203ENST00000425444 E9PMD0 336 aa14.02□□□□□ -0.17
SGCE-203ENST00000425444 SPTLC1O15269 473 aa14.02□□□□□ -0.17
SGCE-203ENST00000425444 NPTXRO95502 500 aa14.02□□□□□ -0.17
SGCE-203ENST00000425444 POMCP01189 267 aa14.02□□□□□ -0.17
SGCE-203ENST00000425444 MLH1P40692 756 aa14.02□□□□□ -0.17
SGCE-203ENST00000425444 NAMPTP43490 491 aa14.02□□□□□ -0.17
SGCE-203ENST00000425444 IL17AQ16552 155 aa14.02□□□□□ -0.17
SGCE-203ENST00000425444 MAPK6Q16659 721 aa14.02□□□□□ -0.17
SGCE-203ENST00000425444 CDCA2Q69YH5 1023 aaPredicted RBP14.02□□□□□ -0.17
SGCE-203ENST00000425444 SLC27A1Q6PCB7 646 aa14.02□□□□□ -0.17
SGCE-203ENST00000425444 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms