RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 FAM187BQ17R55 369 aa16.62■□□□□ 0.25
ATG4B-209ENST00000425239 CDCA2Q69YH5 1023 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-209ENST00000425239 CATSPER3Q86XQ3 398 aa16.62■□□□□ 0.25
ATG4B-209ENST00000425239 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
ATG4B-209ENST00000425239 SMG7Q92540 1137 aaKnown RBP16.62■□□□□ 0.25
ATG4B-209ENST00000425239 WASF1Q92558 559 aa16.62■□□□□ 0.25
ATG4B-209ENST00000425239 GTF3C6Q969F1 213 aa16.62■□□□□ 0.25
ATG4B-209ENST00000425239 NXPE3Q969Y0 559 aa16.62■□□□□ 0.25
ATG4B-209ENST00000425239 CLSTN3Q9BQT9 956 aa16.62■□□□□ 0.25
ATG4B-209ENST00000425239 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.62■□□□□ 0.25
ATG4B-209ENST00000425239 ZDHHC7Q9NXF8 308 aa16.62■□□□□ 0.25
ATG4B-209ENST00000425239 DLGAP2Q9P1A6 1054 aa16.62■□□□□ 0.25
ATG4B-209ENST00000425239 POTEMA6NI47 508 aa16.61■□□□□ 0.25
ATG4B-209ENST00000425239 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
ATG4B-209ENST00000425239 ZMYND10O75800 440 aa16.61■□□□□ 0.25
ATG4B-209ENST00000425239 CFHP08603 1231 aa16.61■□□□□ 0.25
ATG4B-209ENST00000425239 GBP2P32456 591 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-209ENST00000425239 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-209ENST00000425239 LNX1Q8TBB1 728 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-209ENST00000425239 RIN2Q8WYP3 895 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-209ENST00000425239 BSNDQ8WZ55 320 aa16.61■□□□□ 0.25
ATG4B-209ENST00000425239 STAMQ92783 540 aa16.61■□□□□ 0.25
ATG4B-209ENST00000425239 NKD2Q969F2 451 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-209ENST00000425239 PRIMPOLQ96LW4 560 aa16.61■□□□□ 0.25
ATG4B-209ENST00000425239 RPP25Q9BUL9 199 aaKnown RBP16.61■□□□□ 0.25
ATG4B-209ENST00000425239 POLR3FQ9H1D9 316 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-209ENST00000425239 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.61■□□□□ 0.254e-14■■□□□ 13.9
ATG4B-209ENST00000425239 NOTCH4Q99466 2003 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 NEMFO60524 1076 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 JAK2O60674 1132 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 MED24O75448 989 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 NR1I2O75469 434 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 SRFP11831 508 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 HTR4Q13639 388 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 HSP90AA2PQ14568 343 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-209ENST00000425239 DIS3L2Q8IYB7 885 aaKnown RBP16.6■□□□□ 0.25
ATG4B-209ENST00000425239 GPR152Q8TDT2 470 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 TRIM6Q9C030 488 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-209ENST00000425239 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 FBXL21Q9UKT6 434 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 USP20Q9Y2K6 914 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 VWA8A3KMH1 1905 aa16.6■□□□□ 0.25
ATG4B-209ENST00000425239 ADAM12O43184 909 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 USO1O60763 962 aaKnown RBP16.59■□□□□ 0.25
ATG4B-209ENST00000425239 TUSC3Q13454 348 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 ANKRD1Q15327 319 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 PHLDB3Q6NSJ2 640 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 CD300LGQ6UXG3 332 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 MAEAQ7L5Y9 396 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 GLYCTKQ8IVS8 523 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 PIK3R5Q8WYR1 880 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 PDZD7Q9H5P4 517 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 SLC2A4RGQ9NR83 387 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 SNTG2Q9NY99 539 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 PARP2Q9UGN5 583 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 FBXW11Q9UKB1 542 aa16.59■□□□□ 0.25
ATG4B-209ENST00000425239 TADA2AO75478 443 aa16.58■□□□□ 0.24
ATG4B-209ENST00000425239 KIF4AO95239 1232 aa16.58■□□□□ 0.24
ATG4B-209ENST00000425239 GLULP15104 373 aa16.58■□□□□ 0.24
ATG4B-209ENST00000425239 POTEHQ6S545 545 aa16.58■□□□□ 0.24
ATG4B-209ENST00000425239 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
ATG4B-209ENST00000425239 ST13P5Q8NFI4 369 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-209ENST00000425239 FGF14Q92915 247 aa16.58■□□□□ 0.24
ATG4B-209ENST00000425239 POLR3CQ9BUI4 534 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-209ENST00000425239 TUFT1Q9NNX1 390 aa16.58■□□□□ 0.24
ATG4B-209ENST00000425239 PRMT7Q9NVM4 692 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-209ENST00000425239 CA14Q9ULX7 337 aa16.58■□□□□ 0.24
ATG4B-209ENST00000425239 EP300Q09472 2414 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-209ENST00000425239 LRRIQ4A6NIV6 560 aa16.57■□□□□ 0.24
ATG4B-209ENST00000425239 ECM1Q16610 540 aa16.57■□□□□ 0.24
ATG4B-209ENST00000425239 ELMSAN1Q6PJG2 1045 aa16.57■□□□□ 0.24
ATG4B-209ENST00000425239 ADSSL1Q8N142 457 aa16.57■□□□□ 0.24
ATG4B-209ENST00000425239 NACC1Q96RE7 527 aa16.57■□□□□ 0.24
ATG4B-209ENST00000425239 TTPALQ9BTX7 342 aa16.57■□□□□ 0.24
ATG4B-209ENST00000425239 TBC1D17Q9HA65 648 aa16.57■□□□□ 0.24
ATG4B-209ENST00000425239 BRMS1Q9HCU9 246 aa16.57■□□□□ 0.24
ATG4B-209ENST00000425239 NUMBLQ9Y6R0 609 aa16.57■□□□□ 0.24
ATG4B-209ENST00000425239 FANCMQ8IYD8 2048 aa16.57■□□□□ 0.24
ATG4B-209ENST00000425239 COL4A3Q01955 1670 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 CACNA1IQ9P0X4 2223 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 SF3B1O75533 1304 aaKnown RBP eCLIP16.56■□□□□ 0.24
ATG4B-209ENST00000425239 CASTOR2A6NHX0 329 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 ACKR2O00590 384 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 CYP11B2P19099 503 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 ATP2B1P20020 1258 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 RPA1P27694 616 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 STARD6P59095 220 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 NTHL1P78549 312 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 CREMQ03060 361 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 FAM171A1Q5VUB5 890 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 EEF1DP3Q658K8 133 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 PARM1Q6UWI2 310 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 RSPO2Q6UXX9 243 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-209ENST00000425239 GET4Q7L5D6 327 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-209ENST00000425239 GRASPQ7Z6J2 395 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-209ENST00000425239 NOSTRINQ8IVI9 506 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 MAML2Q8IZL2 1156 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-209ENST00000425239 C4orf32Q8N8J7 132 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 MCPH1Q8NEM0 835 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 HASPINQ8TF76 798 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms