RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 ZPBP2Q6X784 338 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 INTS8Q75QN2 995 aaKnown RBP16.28■□□□□ 0.2
CALD1-206ENST00000424922 GPD1LQ8N335 351 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 EIF3CQ99613 913 aaKnown RBP16.28■□□□□ 0.2
CALD1-206ENST00000424922 CRACR2AQ9BSW2 395 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 HAPLN2Q9GZV7 340 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 AGPAT5Q9NUQ2 364 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 ACKR2O00590 384 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 TRIM49P0CI25 452 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 TRIM49CP0CI26 452 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 GNAT1P11488 350 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 CST5P28325 142 aaPredicted RBP16.28■□□□□ 0.2
CALD1-206ENST00000424922 CLCN6P51797 869 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 KIZQ2M2Z5 673 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 PCSK9Q8NBP7 692 aaKnown RBP16.28■□□□□ 0.2
CALD1-206ENST00000424922 SH3TC2Q8TF17 1288 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 DNAJB3Q8WWF6 145 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
CALD1-206ENST00000424922 FAM213AQ9BRX8 229 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 MMRN2Q9H8L6 949 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 AGO2Q9UKV8 859 aaKnown RBP16.28■□□□□ 0.2
CALD1-206ENST00000424922 GINS2Q9Y248 185 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 SPDYE4A6NLX3 237 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 MAPK13O15264 365 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 B4GALT5O43286 388 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 ATP8B1O43520 1251 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 HOXC8P31273 242 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 VAMP7P51809 220 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 DLG4P78352 724 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 KCNMA1Q12791 1236 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 PRPF4BQ13523 1007 aaKnown RBP16.27■□□□□ 0.2
CALD1-206ENST00000424922 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.2
CALD1-206ENST00000424922 WHAMMP3Q1A5X7 153 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 RNF180Q86T96 592 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 EHBP1Q8NDI1 1231 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 FBXL18Q96ME1 805 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 TCHPQ9BT92 498 aa16.27■□□□□ 0.2
CALD1-206ENST00000424922 FAM207AQ9NSI2 230 aaPredicted RBP16.27■□□□□ 0.2
CALD1-206ENST00000424922 CLDN3O15551 220 aa16.27■□□□□ 0.19
CALD1-206ENST00000424922 TMEM132AQ24JP5 1023 aa16.27■□□□□ 0.19
CALD1-206ENST00000424922 FAM47CQ5HY64 1035 aa16.27■□□□□ 0.19
CALD1-206ENST00000424922 ZBTB33Q86T24 672 aa16.27■□□□□ 0.19
CALD1-206ENST00000424922 ZNF410Q86VK4 478 aa16.27■□□□□ 0.19
CALD1-206ENST00000424922 IFNLR1Q8IU57 520 aaPredicted RBP16.27■□□□□ 0.19
CALD1-206ENST00000424922 MSTO1Q9BUK6 570 aa16.27■□□□□ 0.19
CALD1-206ENST00000424922 ZNF446Q9NWS9 450 aa16.27■□□□□ 0.19
CALD1-206ENST00000424922 PLAGL2Q9UPG8 496 aa16.27■□□□□ 0.19
CALD1-206ENST00000424922 A0A0B4J269 797 aa16.26■□□□□ 0.19
CALD1-206ENST00000424922 EXTL3O43909 919 aa16.26■□□□□ 0.19
CALD1-206ENST00000424922 TOM1L1O75674 476 aa16.26■□□□□ 0.19
CALD1-206ENST00000424922 HARSP12081 509 aaKnown RBP16.26■□□□□ 0.19
CALD1-206ENST00000424922 ACOT2P49753 483 aa16.26■□□□□ 0.19
CALD1-206ENST00000424922 LHX8Q68G74 356 aa16.26■□□□□ 0.19
CALD1-206ENST00000424922 PLEKHO2Q8TD55 490 aa16.26■□□□□ 0.19
CALD1-206ENST00000424922 ADAMTS10Q9H324 1103 aa16.26■□□□□ 0.19
CALD1-206ENST00000424922 NHEJ1Q9H9Q4 299 aaPredicted RBP16.26■□□□□ 0.19
CALD1-206ENST00000424922 PRMT7Q9NVM4 692 aaPredicted RBP16.26■□□□□ 0.19
CALD1-206ENST00000424922 GTF2IRD1Q9UHL9 959 aa16.26■□□□□ 0.19
CALD1-206ENST00000424922 ANK1P16157 1881 aa16.26■□□□□ 0.19
CALD1-206ENST00000424922 GPR32O75388 356 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 ZRANB2O95218 330 aaKnown RBP eCLIP16.25■□□□□ 0.19
CALD1-206ENST00000424922 IPO7O95373 1038 aaKnown RBP16.25■□□□□ 0.19
CALD1-206ENST00000424922 FMO5P49326 533 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 ATF7IP2Q5U623 682 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 GDF6Q6KF10 455 aaPredicted RBP16.25■□□□□ 0.19
CALD1-206ENST00000424922 TMCO3Q6UWJ1 677 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 TSHZ1Q6ZSZ6 1077 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 KRT222Q8N1A0 295 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 CCDC127Q96BQ5 260 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 CDHR5Q9HBB8 845 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 PTPN22Q9Y2R2 807 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 ZNF233A6NK53 670 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 KIAA0391O15091 583 aaKnown RBP16.25■□□□□ 0.19
CALD1-206ENST00000424922 EPHB6O15197 1021 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 KRT86O43790 486 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 ABL1P00519 1130 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 CDC42EP1Q00587 391 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 AMPD2Q01433 879 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 CYP24A1Q07973 514 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 FAM187BQ17R55 369 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 ZBTB41Q5SVQ8 909 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 CDR2LQ86X02 465 aaPredicted RBP16.25■□□□□ 0.19
CALD1-206ENST00000424922 VTI1AQ96AJ9 217 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 MFSD14AQ96MC6 490 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 LSM14BQ9BX40 385 aaKnown RBP16.25■□□□□ 0.19
CALD1-206ENST00000424922 KIAA1586Q9HCI6 787 aa16.25■□□□□ 0.19
CALD1-206ENST00000424922 LDHAP00338 332 aaKnown RBP16.24■□□□□ 0.19
CALD1-206ENST00000424922 ZSCAN20P17040 1043 aaPredicted RBP16.24■□□□□ 0.19
CALD1-206ENST00000424922 ACLYP53396 1101 aa16.24■□□□□ 0.19
CALD1-206ENST00000424922 AMHR2Q16671 573 aa16.24■□□□□ 0.19
CALD1-206ENST00000424922 EXOC3L4Q17RC7 722 aa16.24■□□□□ 0.19
CALD1-206ENST00000424922 CBWD6Q4V339 395 aa16.24■□□□□ 0.19
CALD1-206ENST00000424922 SEZ6Q53EL9 994 aa16.24■□□□□ 0.19
CALD1-206ENST00000424922 CBWD3Q5JTY5 395 aa16.24■□□□□ 0.19
CALD1-206ENST00000424922 CBWD5Q5RIA9 395 aa16.24■□□□□ 0.19
CALD1-206ENST00000424922 C1orf220Q5T0J3 134 aa16.24■□□□□ 0.19
CALD1-206ENST00000424922 TEX35Q5T0J7 233 aa16.24■□□□□ 0.19
CALD1-206ENST00000424922 CRELD2Q6UXH1 353 aaPredicted RBP16.24■□□□□ 0.19
CALD1-206ENST00000424922 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
CALD1-206ENST00000424922 NEK11Q8NG66 645 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms