RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 TOX2Q96NM4 488 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 GTPBP4Q9BZE4 634 aaKnown RBP14.63□□□□□ -0.07
PRPF39-202ENST00000424478 RBAKQ9NYW8 714 aaPredicted RBP14.63□□□□□ -0.07
PRPF39-202ENST00000424478 EPB41P11171 864 aaKnown RBP14.63□□□□□ -0.07
PRPF39-202ENST00000424478 RAG1P15918 1043 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 PSMC2P35998 433 aaKnown RBP14.63□□□□□ -0.07
PRPF39-202ENST00000424478 ENOX2Q16206 610 aaKnown RBP14.63□□□□□ -0.07
PRPF39-202ENST00000424478 FAM26DQ5JW98 314 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 ARMCX3Q9UH62 379 aaPredicted RBP14.63□□□□□ -0.07
PRPF39-202ENST00000424478 STYXL1Q9Y6J8 313 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 GCLMP48507 274 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 CDC42EP1Q00587 391 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 MIIPQ5JXC2 388 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 SLC27A1Q6PCB7 646 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 ZC3H3Q8IXZ2 948 aaKnown RBP14.63□□□□□ -0.07
PRPF39-202ENST00000424478 RABGGTAQ92696 567 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 BORCS6Q96GS4 357 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 PARP2Q9UGN5 583 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 IPPQ9Y573 584 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 GARTP22102 1010 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 COPB1P53618 953 aaKnown RBP14.62□□□□□ -0.07
PRPF39-202ENST00000424478 UBASH3AP57075 661 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 C1orf220Q5T0J3 134 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 FILIP1Q7Z7B0 1213 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 SMG8Q8ND04 991 aaKnown RBP14.62□□□□□ -0.07
PRPF39-202ENST00000424478 GOLGA5Q8TBA6 731 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 N4BP3O15049 544 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 GPR182O15218 404 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 OGTO15294 1046 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 EXTL3O43909 919 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 ADCY5O95622 1261 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 PPP3CAQ08209 521 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 NCBP1Q09161 790 aaKnown RBP14.62□□□□□ -0.07
PRPF39-202ENST00000424478 CBWD6Q4V339 395 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 CBWD3Q5JTY5 395 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 CBWD5Q5RIA9 395 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 C1orf53Q5VUE5 145 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 SPC24Q8NBT2 197 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 DPF3Q92784 378 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 ADPGKQ9BRR6 497 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 PCDHB2Q9Y5E7 798 aa14.62□□□□□ -0.07
PRPF39-202ENST00000424478 CITO14578 2027 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 PITPNM1O00562 1244 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 GATMP50440 423 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 TPM4P67936 248 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 CYP24A1Q07973 514 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 CT47A1Q5JQC4 288 aaPredicted RBP14.61□□□□□ -0.07
PRPF39-202ENST00000424478 FAM117BQ6P1L5 589 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 OR5B17Q8NGF7 314 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 CEP63Q96MT8 703 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 SZT2Q5T011 3432 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 ZNF233A6NK53 670 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 LRRIQ3A6PVS8 624 aaPredicted RBP14.61□□□□□ -0.07
PRPF39-202ENST00000424478 RECQL4O94761 1208 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 ZSCAN20P17040 1043 aaPredicted RBP14.61□□□□□ -0.07
PRPF39-202ENST00000424478 GOLGA8FQ08AF8 430 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 GOLGA8DPQ0D2H9 430 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 BFSP1Q12934 665 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 SLFN12LQ6IEE8 588 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 SLC9A9Q8IVB4 645 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 TRIM59Q8IWR1 403 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 BADQ92934 168 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 SLC35C1Q96A29 364 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 TANC1Q9C0D5 1861 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 FAM105AQ9NUU6 356 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 CPSF3Q9UKF6 684 aaKnown RBP14.61□□□□□ -0.07
PRPF39-202ENST00000424478 PLAGL2Q9UPG8 496 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRPF39-202ENST00000424478 ANK1P16157 1881 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 CAPN15O75808 1086 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 UPP2O95045 317 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 SLC10A6Q3KNW5 377 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 C12orf56Q8IXR9 622 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 ZNF516Q92618 1163 aa14.61□□□□□ -0.07
PRPF39-202ENST00000424478 LACTBL1A8MY62 500 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 NFICP08651 508 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 FGFR1P11362 822 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 IGFBP6P24592 240 aaPredicted RBP14.6□□□□□ -0.07
PRPF39-202ENST00000424478 VAMP7P51809 220 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 KCNH2Q12809 1159 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.6□□□□□ -0.07
PRPF39-202ENST00000424478 OTOP2Q7RTS6 562 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 EFCAB13Q8IY85 973 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 FBXL18Q96ME1 805 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 ZMAT2Q96NC0 199 aaKnown RBP14.6□□□□□ -0.07
PRPF39-202ENST00000424478 GOLGA2P5Q9HBQ8 144 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 INPP5FQ9Y2H2 1132 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 ATF7P17544 494 aaPredicted RBP14.6□□□□□ -0.07
PRPF39-202ENST00000424478 TNNI1P19237 187 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 EPHB4P54760 987 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 HCSTQ9UBK5 93 aa14.6□□□□□ -0.07
PRPF39-202ENST00000424478 LIMA1Q9UHB6 759 aaKnown RBP14.6□□□□□ -0.07
PRPF39-202ENST00000424478 CHD9Q3L8U1 2897 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 CLSTN1O94985 981 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 TIMP1P01033 207 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 MCF2P10911 925 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 MLH1P40692 756 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 MRE11P49959 708 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 TFAMQ00059 246 aaKnown RBP14.59□□□□□ -0.07
PRPF39-202ENST00000424478 UBXN1Q04323 297 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms