RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 SHC4Q6S5L8 630 aa20.48■□□□□ 0.87
PRNP-202ENST00000424424 ZBTB33Q86T24 672 aa20.48■□□□□ 0.87
PRNP-202ENST00000424424 DDX53Q86TM3 631 aaKnown RBP20.48■□□□□ 0.87
PRNP-202ENST00000424424 IQUBQ8NA54 791 aa20.48■□□□□ 0.87
PRNP-202ENST00000424424 GSTCDQ8NEC7 633 aa20.48■□□□□ 0.87
PRNP-202ENST00000424424 CDT1Q9H211 546 aa20.48■□□□□ 0.87
PRNP-202ENST00000424424 TOPORSQ9NS56 1045 aaPredicted RBP20.48■□□□□ 0.87
PRNP-202ENST00000424424 SEL1LQ9UBV2 794 aa20.48■□□□□ 0.87
PRNP-202ENST00000424424 REV3LO60673 3130 aa20.48■□□□□ 0.87
PRNP-202ENST00000424424 GAP43P17677 238 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 KCNA5P22460 613 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 PROZP22891 400 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 CA8P35219 290 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 GRM5P41594 1212 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 NRIP1P48552 1158 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 LIG4P49917 911 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 AMPD3Q01432 767 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 ADGRD2Q7Z7M1 963 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 RBM23Q86U06 439 aaKnown RBP20.47■□□□□ 0.87
PRNP-202ENST00000424424 VPS52Q8N1B4 723 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 SPATA32Q96LK8 384 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 CDCA3Q99618 268 aaPredicted RBP20.47■□□□□ 0.87
PRNP-202ENST00000424424 PYM1Q9BRP8 204 aaKnown RBP20.47■□□□□ 0.87
PRNP-202ENST00000424424 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 TNMDQ9H2S6 317 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 ANKFY1Q9P2R3 1169 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 TBX20Q9UMR3 447 aa20.47■□□□□ 0.87
PRNP-202ENST00000424424 CLDN3O15551 220 aa20.46■□□□□ 0.87
PRNP-202ENST00000424424 B4GALT3O60512 393 aa20.46■□□□□ 0.87
PRNP-202ENST00000424424 HARSP12081 509 aaKnown RBP20.46■□□□□ 0.87
PRNP-202ENST00000424424 IDEP14735 1019 aa20.46■□□□□ 0.87
PRNP-202ENST00000424424 NOLC1Q14978 699 aaKnown RBP eCLIP20.46■□□□□ 0.875e-10■■■□□ 17
PRNP-202ENST00000424424 COL19A1Q14993 1142 aa20.46■□□□□ 0.87
PRNP-202ENST00000424424 TMEM173Q86WV6 379 aaPredicted RBP20.46■□□□□ 0.87
PRNP-202ENST00000424424 TMEM87AQ8NBN3 555 aa20.46■□□□□ 0.87
PRNP-202ENST00000424424 DHX58Q96C10 678 aa20.46■□□□□ 0.87
PRNP-202ENST00000424424 ACAP3Q96P50 834 aa20.46■□□□□ 0.87
PRNP-202ENST00000424424 PRG3Q9Y2Y8 225 aaPredicted RBP20.46■□□□□ 0.87
PRNP-202ENST00000424424 PCDHGC5Q9Y5F6 944 aa20.46■□□□□ 0.87
PRNP-202ENST00000424424 HNRNPDLO14979 420 aaKnown RBP20.45■□□□□ 0.86
PRNP-202ENST00000424424 CXCL14O95715 111 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 NMT1P30419 496 aaKnown RBP20.45■□□□□ 0.86
PRNP-202ENST00000424424 GTF2F1P35269 517 aaKnown RBP eCLIP20.45■□□□□ 0.86
PRNP-202ENST00000424424 OSTNP61366 133 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 NUCB2P80303 420 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 GTF2BQ00403 316 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 ADAM15Q13444 863 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 TUSC3Q13454 348 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 CTC1Q2NKJ3 1217 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 SFR1Q86XK3 245 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 EFHBQ8N7U6 833 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 DNAJC19Q96DA6 116 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 ZBTB45Q96K62 511 aaPredicted RBP20.45■□□□□ 0.86
PRNP-202ENST00000424424 SCAND2PQ9GZW5 306 aaPredicted RBP20.45■□□□□ 0.86
PRNP-202ENST00000424424 ST6GALNAC4Q9H4F1 302 aa20.45■□□□□ 0.86
PRNP-202ENST00000424424 MRPL44Q9H9J2 332 aaKnown RBP20.45■□□□□ 0.86
PRNP-202ENST00000424424 TCF20Q9UGU0 1960 aaKnown RBP20.45■□□□□ 0.86
PRNP-202ENST00000424424 PTGESO14684 152 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 PER2O15055 1255 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 POLR2DO15514 142 aaKnown RBP20.44■□□□□ 0.86
PRNP-202ENST00000424424 SRGAP2BP0DMP2 458 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 CTSAP10619 480 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 NDUFV1P49821 464 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 MCL1Q07820 350 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 E2F4Q16254 413 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 DUSP6Q16828 381 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 PUS10Q3MIT2 529 aaKnown RBP20.44■□□□□ 0.86
PRNP-202ENST00000424424 LEXMQ3ZCV2 418 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 HERC4Q5GLZ8 1057 aaPredicted RBP20.44■□□□□ 0.86
PRNP-202ENST00000424424 RESP18Q5W5W9 173 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 CCDC65Q8IXS2 484 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 CEP120Q8N960 986 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 MRPL43Q8N983 215 aaKnown RBP20.44■□□□□ 0.86
PRNP-202ENST00000424424 BCL7CQ8WUZ0 217 aaPredicted RBP20.44■□□□□ 0.86
PRNP-202ENST00000424424 LEO1Q8WVC0 666 aaPredicted RBP20.44■□□□□ 0.86
PRNP-202ENST00000424424 HVCN1Q96D96 273 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 FIZ1Q96SL8 496 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 ZBP1Q9H171 429 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 MAGEF1Q9HAY2 307 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 PANK4Q9NVE7 773 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 KBTBD4Q9NVX7 518 aa20.44■□□□□ 0.86
PRNP-202ENST00000424424 ABLIM1O14639 778 aa20.43■□□□□ 0.86
PRNP-202ENST00000424424 PIGRP01833 764 aa20.43■□□□□ 0.86
PRNP-202ENST00000424424 KCNQ1P51787 676 aa20.43■□□□□ 0.86
PRNP-202ENST00000424424 KYAT1Q16773 422 aa20.43■□□□□ 0.86
PRNP-202ENST00000424424 ADALQ6DHV7 355 aa20.43■□□□□ 0.86
PRNP-202ENST00000424424 ZNF720Q7Z2F6 126 aa20.43■□□□□ 0.86
PRNP-202ENST00000424424 STAMQ92783 540 aa20.43■□□□□ 0.86
PRNP-202ENST00000424424 MARCH5Q9NX47 278 aa20.43■□□□□ 0.86
PRNP-202ENST00000424424 FAM50BQ9Y247 325 aa20.43■□□□□ 0.86
PRNP-202ENST00000424424 SSX2IPQ9Y2D8 614 aa20.43■□□□□ 0.86
PRNP-202ENST00000424424 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.42■□□□□ 0.86
PRNP-202ENST00000424424 C2orf71A6NGG8 1288 aa20.42■□□□□ 0.86
PRNP-202ENST00000424424 HIDE1A8MVS5 230 aa20.42■□□□□ 0.86
PRNP-202ENST00000424424 H3BQ06 376 aaPredicted RBP20.42■□□□□ 0.86
PRNP-202ENST00000424424 LINC01565O15544 149 aa20.42■□□□□ 0.86
PRNP-202ENST00000424424 TADA2AO75478 443 aa20.42■□□□□ 0.86
PRNP-202ENST00000424424 SOD2P04179 222 aa20.42■□□□□ 0.86
PRNP-202ENST00000424424 HSP90AA2PQ14568 343 aaPredicted RBP20.42■□□□□ 0.86
PRNP-202ENST00000424424 ZC2HC1CQ53FD0 456 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms