RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 AGPAT1Q99943 283 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 LRMDAQ9H2I8 198 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 PSTPIP2Q9H939 334 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 ANKRD62A6NC57 917 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 STAT1P42224 750 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 ITGA8P53708 1063 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 FESP07332 822 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 CFHP08603 1231 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 GNAT1P11488 350 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 CALB2P22676 271 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 CHRNA3P32297 505 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 SHMT1P34896 483 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 EPC2Q52LR7 807 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 WDR60Q8WVS4 1066 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 C10orf82Q8WW14 230 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 C9orf72Q96LT7 481 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 CYP39A1Q9NYL5 469 aa13.82□□□□□ -0.2
TOP2B-203ENST00000424225 QSER1Q2KHR3 1735 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 A0A1W2PPM1 405 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 MPHOSPH10O00566 681 aaKnown RBP13.81□□□□□ -0.2
TOP2B-203ENST00000424225 FERP16591 822 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 HADHBP55084 474 aaKnown RBP13.81□□□□□ -0.2
TOP2B-203ENST00000424225 KRT17Q04695 432 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 CCDC142Q17RM4 750 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 HSF5Q4G112 596 aaPredicted RBP13.81□□□□□ -0.2
TOP2B-203ENST00000424225 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 RPUSD2Q8IZ73 545 aaKnown RBP13.81□□□□□ -0.2
TOP2B-203ENST00000424225 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 SLC5A5Q92911 643 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 WDR83Q9BRX9 315 aaKnown RBP13.81□□□□□ -0.2
TOP2B-203ENST00000424225 KCNK9Q9NPC2 374 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 APEX2Q9UBZ4 518 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 PLIN4Q96Q06 1357 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 TTC4O95801 387 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 SP100P23497 879 aaPredicted RBP13.81□□□□□ -0.2
TOP2B-203ENST00000424225 CYP2J2P51589 502 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 RAD23BP54727 409 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 QRICH1Q2TAL8 776 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 CES4AQ5XG92 561 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 ENDOVQ8N8Q3 282 aaKnown RBP13.81□□□□□ -0.2
TOP2B-203ENST00000424225 WDR18Q9BV38 432 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.81□□□□□ -0.22e-6■□□□□ 8.9
TOP2B-203ENST00000424225 GTPBP10A4D1E9 387 aaKnown RBP13.81□□□□□ -0.2
TOP2B-203ENST00000424225 TCF4P15884 667 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 RPA1P27694 616 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 VPS41P49754 854 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 TBC1D25Q3MII6 688 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 FAM186BQ8IYM0 893 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 STK32AQ8WU08 396 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 STRA6Q9BX79 667 aa13.81□□□□□ -0.2
TOP2B-203ENST00000424225 SEPT11Q9NVA2 429 aaKnown RBP13.81□□□□□ -0.2
TOP2B-203ENST00000424225 SLITRK3O94933 977 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 PECAM1P16284 738 aaPredicted RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 YY1P25490 414 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 RPA3P35244 121 aaPredicted RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 FMO1Q01740 532 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 IFI16Q16666 785 aaKnown RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 TBC1D10BQ4KMP7 808 aaPredicted RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 ZNF772Q68DY9 489 aaPredicted RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 C11orf63Q6NUN7 778 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 C12orf50Q8NA57 414 aaPredicted RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 CCHCR1Q8TD31 782 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 CTNNBL1Q8WYA6 563 aaPredicted RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 ARHGEF4Q9NR80 690 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 NMRK1Q9NWW6 199 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 ETS1P14921 441 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 HOXA13P31271 388 aaPredicted RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 ERFP50548 548 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 GPSM2P81274 684 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 PICALMQ13492 652 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 MAPK6Q16659 721 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 ZNF449Q6P9G9 518 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 LONP2Q86WA8 852 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 CCDC105Q8IYK2 499 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 EPS8L1Q8TE68 723 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 PTPRN2Q92932 1015 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 SH2D3AQ9BRG2 576 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 ANO3Q9BYT9 981 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 NT5C3AQ9H0P0 336 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 LRRC19Q9H756 370 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 AGPAT3Q9NRZ7 376 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 C2CD2Q9Y426 696 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 KIF3CO14782 793 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 LIN7AO14910 233 aaPredicted RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 ZBTB5O15062 677 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 SUN1O94901 812 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 PSMC4P43686 418 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 ACVR2BQ13705 512 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 RNF207Q6ZRF8 634 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 CCNJLQ8IV13 435 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 RFWD2Q8NHY2 731 aa13.8□□□□□ -0.2
TOP2B-203ENST00000424225 DDX1Q92499 740 aaKnown RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 DDX50Q9BQ39 737 aaKnown RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 CADM1Q9BY67 442 aaKnown RBP13.8□□□□□ -0.2
TOP2B-203ENST00000424225 ADGRA3Q8IWK6 1321 aa13.79□□□□□ -0.2
TOP2B-203ENST00000424225 SLC16A3O15427 465 aaKnown RBP13.79□□□□□ -0.2
TOP2B-203ENST00000424225 ZSCAN5DPP0CG00 497 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms