RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	PBX4	Q9BYU1	374 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	BCAS3	Q9H6U6	928 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	ATP6V0A4	Q9HBG4	840 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	SPC25	Q9HBM1	224 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	KIAA1586	Q9HCI6	787 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	POLD4	Q9HCU8	107 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	KMT5A	Q9NQR1	393 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	CYP26B1	Q9NR63	512 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	NRBP2	Q9NSY0	501 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	OGFR	Q9NZT2	677 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	TBX20	Q9UMR3	447 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089		V9GYY5	206 aa	Predicted RBP	10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	IGSF9B	Q9UPX0	1349 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	IGKV6D-21	A0A0A0MT36	114 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	CCDC169	A6NNP5	214 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	SLC16A4	O15374	487 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	ADAMTS4	O75173	837 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	PGK2	P07205	417 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	GART	P22102	1010 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	SOX5	P35711	763 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	RFC5	P40937	340 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	NPTX2	P47972	431 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	NPEPPS	P55786	919 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	MYL7	Q01449	175 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	TMEM31	Q5JXX7	168 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	TEX35	Q5T0J7	233 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	FAM160B1	Q5W0V3	765 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	FBXO38	Q6PIJ6	1188 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	TMCO3	Q6UWJ1	677 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	MSL3	Q8N5Y2	521 aa	Known RBP	10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	PCSK9	Q8NBP7	692 aa	Known RBP	10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	MSANTD4	Q8NCY6	345 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	TMC2	Q8TDI7	906 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	LMBR1	Q8WVP7	490 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	INTS2	Q9H0H0	1204 aa	Known RBP	10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	ZNF302	Q9NR11	478 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	HSPBP1	Q9NZL4	362 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	APEX2	Q9UBZ4	518 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	TRIM10	Q9UDY6	481 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	SNX12	Q9UMY4	172 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089	FHOD1	Q9Y613	1164 aa		10.87	□□□□□ -0.67
POLR1A-204	ENST00000424089		A0A0A6YYK5	440 aa	Predicted RBP	10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	MACROD2	A1Z1Q3	448 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	DENND3	A2RUS2	1198 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	CCDC151	A5D8V7	595 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	ZNF862	O60290	1169 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	ERLIN1	O75477	346 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	ATP1A1	P05023	1023 aa	Known RBP	10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	ACTN1	P12814	892 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	PRKCE	Q02156	737 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	PTK2	Q05397	1052 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	KCNA10	Q16322	511 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	AAK1	Q2M2I8	961 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	ZNF792	Q3KQV3	632 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	TMEM240	Q5SV17	173 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	CCDC70	Q6NSX1	233 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	MAEA	Q7L5Y9	396 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	ZNF572	Q7Z3I7	529 aa	Predicted RBP	10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	KSR1	Q8IVT5	923 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	LRRN4CL	Q8ND94	238 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	AFAP1L1	Q8TED9	768 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	RUBCN	Q92622	972 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	FAM167A	Q96KS9	214 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	FBXL18	Q96ME1	805 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	SLC28A3	Q9HAS3	691 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	ADAMTS1	Q9UHI8	967 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	DDX41	Q9UJV9	622 aa	Known RBP	10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	DNAJC12	Q9UKB3	198 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	TBX21	Q9UL17	535 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	RAB21	Q9UL25	225 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	HYOU1	Q9Y4L1	999 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	PCDHGC5	Q9Y5F6	944 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089	GBF1	Q92538	1859 aa		10.86	□□□□□ -0.67
POLR1A-204	ENST00000424089		A0A087X0T9	212 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089		A0A0U1RQG5	324 aa	Predicted RBP	10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	TARSL2	A2RTX5	802 aa	Known RBP	10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089		F8VZ95	297 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	CES2	O00748	559 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	GAS2	O43903	313 aa	Known RBP	10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	DUSP11	O75319	330 aa	Known RBP	10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	OAT	P04181	439 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	C6orf222	P0C671	652 aa	Predicted RBP	10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	FAM228B	P0C875	321 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	CSF2RA	P15509	400 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	PBX2	P40425	430 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	SKIV2L	Q15477	1246 aa	Known RBP	10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	KIAA0753	Q2KHM9	967 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	PLA2G4F	Q68DD2	849 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	SLFN12L	Q6IEE8	588 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	ALKBH5	Q6P6C2	394 aa	Known RBP	10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	METTL7B	Q6UX53	244 aa		10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.85	□□□□□ -0.67
POLR1A-204	ENST00000424089	MICALL1	Q8N3F8	863 aa		10.85	□□□□□ -0.67

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