RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 FPGT-TNNI3KV9GXZ4 949 aa6.79□□□□□ -1.32
LINC00458-201ENST00000423442 ALPK3Q96L96 1907 aa6.79□□□□□ -1.32
LINC00458-201ENST00000423442 MYPNQ86TC9 1320 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 ENTPD3O75355 529 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 KCNH1O95259 989 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 THBDP07204 575 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 CETPP11597 493 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 HOXD10P28358 340 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 STAT5AP42229 794 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 UBXN2AP68543 259 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 MAP3K12Q12852 859 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 COL9A2Q14055 689 aaPredicted RBP6.78□□□□□ -1.32
LINC00458-201ENST00000423442 TTF1Q15361 905 aaPredicted RBP6.78□□□□□ -1.32
LINC00458-201ENST00000423442 INF2Q27J81 1249 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 BORAQ6PGQ7 559 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 GLB1LQ6UWU2 654 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 SPRED1Q7Z699 444 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 CERS3Q8IU89 383 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 C19orf47Q8N9M1 422 aaKnown RBP6.78□□□□□ -1.32
LINC00458-201ENST00000423442 DVL3Q92997 716 aaPredicted RBP6.78□□□□□ -1.32
LINC00458-201ENST00000423442 KIF1BPQ96EK5 621 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 MMP19Q99542 508 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 PCDH18Q9HCL0 1135 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 ZCCHC17Q9NP64 241 aaKnown RBP6.78□□□□□ -1.32
LINC00458-201ENST00000423442 ZBTB40Q9NUA8 1239 aa6.78□□□□□ -1.32
LINC00458-201ENST00000423442 ARAP2Q8WZ64 1704 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 GPR75-ASB3A0A0A6YYF3 556 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 C22orf46C9J442 243 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 IDH1O75874 414 aaKnown RBP6.77□□□□□ -1.33
LINC00458-201ENST00000423442 TFRCP02786 760 aaKnown RBP6.77□□□□□ -1.33
LINC00458-201ENST00000423442 BTDP43251 543 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 SOX9P48436 509 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 RGS3P49796 1198 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 PRKCZQ05513 592 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 SNAPC2Q13487 334 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 PICALMQ13492 652 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 PPP2R5EQ16537 467 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 KIAA1211LQ6NV74 962 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 TMED8Q6PL24 325 aaPredicted RBP6.77□□□□□ -1.33
LINC00458-201ENST00000423442 ERO1BQ86YB8 467 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 SH3RF3Q8TEJ3 882 aaPredicted RBP6.77□□□□□ -1.33
LINC00458-201ENST00000423442 ZKSCAN4Q969J2 545 aaPredicted RBP6.77□□□□□ -1.33
LINC00458-201ENST00000423442 PAWRQ96IZ0 340 aaKnown RBP6.77□□□□□ -1.33
LINC00458-201ENST00000423442 DEFB118Q96PH6 123 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 WRNIP1Q96S55 665 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 IDI2Q9BXS1 227 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 ZMYND8Q9ULU4 1186 aaPredicted RBP6.77□□□□□ -1.33
LINC00458-201ENST00000423442 GABRQQ9UN88 632 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 MGAMO43451 1857 aa6.77□□□□□ -1.33
LINC00458-201ENST00000423442 PDHXO00330 501 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 B4GALT3O60512 393 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 C6P13671 934 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 FPR2P25090 351 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 MCAMP43121 646 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 PPATQ06203 517 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 LRIT3Q3SXY7 679 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 MILR1Q7Z6M3 343 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 ZC3H18Q86VM9 953 aaKnown RBP6.76□□□□□ -1.33
LINC00458-201ENST00000423442 TEX11Q8IYF3 940 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 DIS3LQ8TF46 1054 aaKnown RBP6.76□□□□□ -1.33
LINC00458-201ENST00000423442 NSUN4Q96CB9 384 aaKnown RBP6.76□□□□□ -1.33
LINC00458-201ENST00000423442 EAF2Q96CJ1 260 aaPredicted RBP6.76□□□□□ -1.33
LINC00458-201ENST00000423442 GPATCH3Q96I76 525 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 SORCS2Q96PQ0 1159 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 LRRCC1Q9C099 1032 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 DHX36Q9H2U1 1008 aaKnown RBP6.76□□□□□ -1.33
LINC00458-201ENST00000423442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.76□□□□□ -1.33
LINC00458-201ENST00000423442 IL1RAPL2Q9NP60 686 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 EMC9Q9Y3B6 208 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 VCANP13611 3396 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 MROH7-TTC4A0A0A0MT08 1334 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 ADGRA2Q96PE1 1338 aa6.76□□□□□ -1.33
LINC00458-201ENST00000423442 SPTBN5Q9NRC6 3674 aaKnown RBP6.75□□□□□ -1.33
LINC00458-201ENST00000423442 ANKRD34BA5PLL1 514 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 ADCY3O60266 1144 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 CTNND1O60716 968 aaKnown RBP6.75□□□□□ -1.33
LINC00458-201ENST00000423442 PPIL2Q13356 520 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 CDSNQ15517 529 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 SLC9C2Q5TAH2 1124 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 ZSCAN25Q6NSZ9 544 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 FASTKD5Q7L8L6 764 aaKnown RBP6.75□□□□□ -1.33
LINC00458-201ENST00000423442 NECAB2Q7Z6G3 386 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 ANKRD23Q86SG2 305 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 FOXP4Q8IVH2 680 aaPredicted RBP6.75□□□□□ -1.33
LINC00458-201ENST00000423442 TDHQ8IZJ6 230 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 Q8N1X5 172 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 CRACR2BQ8N4Y2 399 aaPredicted RBP6.75□□□□□ -1.33
LINC00458-201ENST00000423442 SEC14L1Q92503 715 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 LCORQ96JN0 433 aaPredicted RBP6.75□□□□□ -1.33
LINC00458-201ENST00000423442 GUCD1Q96NT3 240 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 LGR4Q9BXB1 951 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.75□□□□□ -1.33
LINC00458-201ENST00000423442 PPP4R1LQ9P1A2 415 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 PI4KBQ9UBF8 816 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 DBNLQ9UJU6 430 aaKnown RBP6.75□□□□□ -1.33
LINC00458-201ENST00000423442 GAKO14976 1311 aa6.75□□□□□ -1.33
LINC00458-201ENST00000423442 EYSQ5T1H1 3165 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 HLA-DOAP06340 250 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 FLT3LGP49771 235 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 CYP4F3Q08477 520 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms