RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CCDC169A6NNP5 214 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 C2CD4DB7Z1M9 353 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 TEX28O15482 410 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 NR1I2O75469 434 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 MTHFRP42898 656 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 NPTX2P47972 431 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 EFNA5P52803 228 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 DSG1Q02413 1049 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 ATF7IP2Q5U623 682 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 KIAA1841Q6NSI8 718 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 FUT10Q6P4F1 479 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 C1orf186Q6ZWK4 172 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 TAS1R3Q7RTX0 852 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 HASPINQ8TF76 798 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 RIPOR3Q96MK2 946 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 NECTIN4Q96NY8 510 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 ADAM28Q9UKQ2 775 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 GDAQ9Y2T3 454 aa16.72■□□□□ 0.27
USB1-202ENST00000423271 PHLPP2Q6ZVD8 1323 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 TRIP11Q15643 1979 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 MYBP10242 640 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 ZXDAP98168 799 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 RAD51AP2Q09MP3 1159 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 TUSC3Q13454 348 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 HSP90AA2PQ14568 343 aaPredicted RBP16.71■□□□□ 0.27
USB1-202ENST00000423271 NAB2Q15742 525 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 DCAF4L1Q3SXM0 396 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 HYIQ5T013 277 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 SFXN1Q9H9B4 322 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 RXFP1Q9HBX9 757 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 CHST7Q9NS84 486 aa16.71■□□□□ 0.27
USB1-202ENST00000423271 ZDBF2Q9HCK1 2354 aa16.71■□□□□ 0.26
USB1-202ENST00000423271 WDFY4Q6ZS81 3184 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 MYO10Q9HD67 2058 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 SPDYE4A6NLX3 237 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 SFI1A8K8P3 1242 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 K7ERI5 159 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 KIF4AO95239 1232 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 ADH1AP07327 375 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 PLA2G5P39877 138 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 DMP1Q13316 513 aaPredicted RBP16.7■□□□□ 0.26
USB1-202ENST00000423271 PTPN21Q16825 1174 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 TMEM119Q4V9L6 283 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 GLRA4Q5JXX5 417 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 TRIM67Q6ZTA4 783 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 CEP120Q8N960 986 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 DRC1Q96MC2 740 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 MAN1C1Q9NR34 630 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 ARHGAP28Q9P2N2 729 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 TNFSF13BQ9Y275 285 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 SSX2IPQ9Y2D8 614 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 NR2E1Q9Y466 385 aa16.7■□□□□ 0.26
USB1-202ENST00000423271 MYH11P35749 1972 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 VPS37CA5D8V6 355 aaPredicted RBP16.69■□□□□ 0.26
USB1-202ENST00000423271 TMEM221A6NGB7 291 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 M0R296 226 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 SLC16A4O15374 487 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 TADA2AO75478 443 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 THP07101 528 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 PDCP20941 246 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 SYT1P21579 422 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 GUCY2CP25092 1073 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 SLC12A3P55017 1021 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 USP41Q3LFD5 358 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 RTP2Q5QGT7 225 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 ATAT1Q5SQI0 421 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 ARL6IP4Q66PJ3 421 aaKnown RBP16.69■□□□□ 0.26
USB1-202ENST00000423271 GPR149Q86SP6 731 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 GLYCTKQ8IVS8 523 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 SPRYD3Q8NCJ5 442 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 LRRC15Q8TF66 581 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 RIN2Q8WYP3 895 aaPredicted RBP16.69■□□□□ 0.26
USB1-202ENST00000423271 ACO2Q99798 780 aaKnown RBP16.69■□□□□ 0.26
USB1-202ENST00000423271 TARS2Q9BW92 718 aaKnown RBP16.69■□□□□ 0.26
USB1-202ENST00000423271 CDT1Q9H211 546 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 KMT5AQ9NQR1 393 aa16.69■□□□□ 0.26
USB1-202ENST00000423271 VWA8A3KMH1 1905 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 NPHP3-ACAD11A0A0J9YXS1 232 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 GLUD1P00367 558 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
USB1-202ENST00000423271 PLA2G4BP0C869 781 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 SPATA31D3P0C874 917 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 RPL17P18621 184 aaKnown RBP16.68■□□□□ 0.26
USB1-202ENST00000423271 IGFBP6P24592 240 aaPredicted RBP16.68■□□□□ 0.26
USB1-202ENST00000423271 CACNB1Q02641 598 aaPredicted RBP16.68■□□□□ 0.26
USB1-202ENST00000423271 GRIN1Q05586 938 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 ZNF568Q3ZCX4 644 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 PRSS55Q6UWB4 352 aaPredicted RBP16.68■□□□□ 0.26
USB1-202ENST00000423271 SPATA31D4Q6ZUB0 917 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 SYT2Q8N9I0 419 aaPredicted RBP16.68■□□□□ 0.26
USB1-202ENST00000423271 TDRD5Q8NAT2 981 aaKnown RBP16.68■□□□□ 0.26
USB1-202ENST00000423271 FAM122AQ96E09 287 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 CDK5RAP3Q96JB5 506 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 MRPL4Q9BYD3 311 aaKnown RBP16.68■□□□□ 0.26
USB1-202ENST00000423271 NT5C3AQ9H0P0 336 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 TMEM134Q9H6X4 195 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 PTPRHQ9HD43 1115 aa16.68■□□□□ 0.26
USB1-202ENST00000423271 SF3B1O75533 1304 aaKnown RBP eCLIP16.68■□□□□ 0.26
USB1-202ENST00000423271 ABLIM1O14639 778 aa16.67■□□□□ 0.26
USB1-202ENST00000423271 RFPL2O75678 378 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms