RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 RPGRIP1Q96KN7 1286 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 PNMA5Q96PV4 448 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 TRIM6Q9C030 488 aaPredicted RBP9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 GPRC5CQ9NQ84 441 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 PRMT7Q9NVM4 692 aaPredicted RBP9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 DZANK1Q9NVP4 752 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 LHX6Q9UPM6 363 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 GIT1Q9Y2X7 761 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 KIF3AQ9Y496 699 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 HES2Q9Y543 173 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 ZMYM2Q9UBW7 1377 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 MTCL1Q9Y4B5 1905 aaKnown RBP9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 TECTAO75443 2155 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 MYO10Q9HD67 2058 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 C2orf16Q68DN1 1984 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 PLXNA3P51805 1871 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 DENND4AQ7Z401 1863 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 NRP1O14786 923 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 B4GALT5O43286 388 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 NPTXRO95502 500 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 CYP11B2P19099 503 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 CCT6AP40227 531 aaKnown RBP9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 MLH1P40692 756 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 DSC1Q08554 894 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 CCDC173Q0VFZ6 552 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 PTPN14Q15678 1187 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 FAM187BQ17R55 369 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 HS1BP3Q53T59 392 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 C6orf132Q5T0Z8 1188 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 CDCA2Q69YH5 1023 aaPredicted RBP9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 CES5AQ6NT32 575 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 PPFIBP1Q86W92 1011 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 ZBTB8OSQ8IWT0 167 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 COLGALT2Q8IYK4 626 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 DAW1Q8N136 415 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 IGSF22Q8N9C0 903 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 SLC22A17Q8WUG5 538 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 FAM122AQ96E09 287 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 ZFP42Q96MM3 310 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 NECTIN4Q96NY8 510 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 PPP1R9BQ96SB3 815 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 GAD1Q99259 594 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 APOL6Q9BWW8 343 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 APOL5Q9BWW9 433 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 EMILIN2Q9BXX0 1053 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 RAB34Q9BZG1 259 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 C2orf40Q9H1Z8 148 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 CXCL16Q9H2A7 254 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 ADAM7Q9H2U9 754 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 FZD8Q9H461 694 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 NXF3Q9H4D5 531 aaKnown RBP9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 LRWD1Q9UFC0 647 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 USP20Q9Y2K6 914 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 CLIC4Q9Y696 253 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 ZNF318Q5VUA4 2279 aa9.05□□□□□ -0.96
TRIM43CP-201ENST00000422468 MYH11P35749 1972 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 TRIP11Q15643 1979 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 MUC6Q6W4X9 2439 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 A0A087X0B3 334 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 LAD1O00515 517 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 LILRB3O75022 631 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 NR1I2O75469 434 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 EFEMP2O95967 443 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 SOD2P04179 222 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 SSBP05455 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 EPCAMP16422 314 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 AKAP5P24588 427 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 MTHFRP42898 656 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 NAMPTP43490 491 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 OR1G1P47890 313 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 SCNN1GP51170 649 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 ZNF445P59923 1031 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 ATP2C1P98194 919 aaPredicted RBP9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 MAPK7Q13164 816 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 PRPF4BQ13523 1007 aaKnown RBP9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 PPP2R5AQ15172 486 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 MAPK6Q16659 721 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 TMEM132AQ24JP5 1023 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 RIPOR3Q96MK2 946 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 KLHL5Q96PQ7 755 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 COLEC11Q9BWP8 271 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 CCDC113Q9H0I3 377 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 MRPL17Q9NRX2 175 aaKnown RBP9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 MARCH5Q9NX47 278 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 MIOSQ9NXC5 875 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 KIAA1024Q9UPX6 916 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 SMC3Q9UQE7 1217 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 SSX2IPQ9Y2D8 614 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 PRG3Q9Y2Y8 225 aaPredicted RBP9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 NR2E1Q9Y466 385 aa9.04□□□□□ -0.96
TRIM43CP-201ENST00000422468 ESPNB1AK53 854 aa9.03□□□□□ -0.96
TRIM43CP-201ENST00000422468 ACKR2O00590 384 aa9.03□□□□□ -0.96
TRIM43CP-201ENST00000422468 N4BP3O15049 544 aa9.03□□□□□ -0.96
TRIM43CP-201ENST00000422468 MEFVO15553 781 aaPredicted RBP9.03□□□□□ -0.96
TRIM43CP-201ENST00000422468 PRKCBP05771 671 aa9.03□□□□□ -0.96
TRIM43CP-201ENST00000422468 URODP06132 367 aa9.03□□□□□ -0.96
TRIM43CP-201ENST00000422468 CNPP09543 421 aaKnown RBP9.03□□□□□ -0.96
TRIM43CP-201ENST00000422468 KLRC2P26717 231 aa9.03□□□□□ -0.96
TRIM43CP-201ENST00000422468 PRPHP41219 470 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms