RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 NT5DC1Q5TFE4 455 aa24.07■■□□□ 1.44
TRAF4-204ENST00000422344 EEF1DP3Q658K8 133 aa24.07■■□□□ 1.44
TRAF4-204ENST00000422344 SPIRE2Q8WWL2 714 aa24.07■■□□□ 1.44
TRAF4-204ENST00000422344 CCSER1Q9C0I3 900 aa24.07■■□□□ 1.44
TRAF4-204ENST00000422344 LARSQ9P2J5 1176 aaKnown RBP24.07■■□□□ 1.44
TRAF4-204ENST00000422344 FBXO2Q9UK22 296 aaPredicted RBP24.07■■□□□ 1.44
TRAF4-204ENST00000422344 TNFSF13BQ9Y275 285 aa24.07■■□□□ 1.44
TRAF4-204ENST00000422344 SRPRBQ9Y5M8 271 aaKnown RBP24.07■■□□□ 1.44
TRAF4-204ENST00000422344 TMEM221A6NGB7 291 aa24.06■■□□□ 1.44
TRAF4-204ENST00000422344 M0R296 226 aa24.06■■□□□ 1.44
TRAF4-204ENST00000422344 CTSAP10619 480 aa24.06■■□□□ 1.44
TRAF4-204ENST00000422344 PDIA4P13667 645 aaKnown RBP24.06■■□□□ 1.44
TRAF4-204ENST00000422344 CACNB1Q02641 598 aaPredicted RBP24.06■■□□□ 1.44
TRAF4-204ENST00000422344 DSC1Q08554 894 aa24.06■■□□□ 1.44
TRAF4-204ENST00000422344 LLGL2Q6P1M3 1020 aa24.06■■□□□ 1.44
TRAF4-204ENST00000422344 TRIM67Q6ZTA4 783 aa24.06■■□□□ 1.44
TRAF4-204ENST00000422344 RAD54LQ92698 747 aa24.06■■□□□ 1.44
TRAF4-204ENST00000422344 USP28Q96RU2 1077 aa24.06■■□□□ 1.44
TRAF4-204ENST00000422344 COLEC11Q9BWP8 271 aa24.06■■□□□ 1.44
TRAF4-204ENST00000422344 ODF2LQ9ULJ1 636 aa24.06■■□□□ 1.44
TRAF4-204ENST00000422344 ZDBF2Q9HCK1 2354 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 NPHP3-ACAD11A0A0J9YXS1 232 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 H0YCG3 227 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 RECQL4O94761 1208 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 RBM10P98175 930 aaKnown RBP24.05■■□□□ 1.44
TRAF4-204ENST00000422344 ZNF568Q3ZCX4 644 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 SPECC1Q5M775 1068 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 BMP8AQ7Z5Y6 402 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 AUTS2Q8WXX7 1259 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 PBXIP1Q96AQ6 731 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 EPSTI1Q96J88 318 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 ZNF396Q96N95 335 aaPredicted RBP24.05■■□□□ 1.44
TRAF4-204ENST00000422344 NTPCRQ9BSD7 190 aaKnown RBP24.05■■□□□ 1.44
TRAF4-204ENST00000422344 TCHPQ9BT92 498 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 BLOC1S4Q9NUP1 217 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 GDAQ9Y2T3 454 aa24.05■■□□□ 1.44
TRAF4-204ENST00000422344 TDRD15B5MCY1 1934 aaKnown RBP24.05■■□□□ 1.44
TRAF4-204ENST00000422344 FAM13AO94988 1023 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 ZXDAP98168 799 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 MCM6Q14566 821 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 CBX2Q14781 532 aaPredicted RBP24.04■■□□□ 1.44
TRAF4-204ENST00000422344 SLC39A14Q15043 492 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 STK38Q15208 465 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 ARSHQ5FYA8 562 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 GSTCDQ8NEC7 633 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 VN1R2Q8NFZ6 395 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 LARP4BQ92615 738 aaKnown RBP24.04■■□□□ 1.44
TRAF4-204ENST00000422344 CASP10Q92851 521 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 RPGRIP1Q96KN7 1286 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 ACO2Q99798 780 aaKnown RBP24.04■■□□□ 1.44
TRAF4-204ENST00000422344 REEP2Q9BRK0 252 aa24.04■■□□□ 1.44
TRAF4-204ENST00000422344 TARS2Q9BW92 718 aaKnown RBP24.04■■□□□ 1.44
TRAF4-204ENST00000422344 PHF7Q9BWX1 381 aaPredicted RBP24.04■■□□□ 1.44
TRAF4-204ENST00000422344 TBCAO75347 108 aaKnown RBP24.03■■□□□ 1.44
TRAF4-204ENST00000422344 TUSC3Q13454 348 aa24.03■■□□□ 1.44
TRAF4-204ENST00000422344 IER5LQ5T953 404 aa24.03■■□□□ 1.44
TRAF4-204ENST00000422344 FOXD4L5Q5VV16 416 aaPredicted RBP24.03■■□□□ 1.44
TRAF4-204ENST00000422344 KRI1Q8N9T8 703 aaKnown RBP24.03■■□□□ 1.44
TRAF4-204ENST00000422344 FOXD4L4Q8WXT5 416 aaPredicted RBP24.03■■□□□ 1.44
TRAF4-204ENST00000422344 CLIC6Q96NY7 704 aa24.03■■□□□ 1.44
TRAF4-204ENST00000422344 CCDC94Q9BW85 323 aaPredicted RBP24.03■■□□□ 1.44
TRAF4-204ENST00000422344 VN1R3Q9BXE9 311 aa24.03■■□□□ 1.44
TRAF4-204ENST00000422344 EMILIN2Q9BXX0 1053 aa24.03■■□□□ 1.44
TRAF4-204ENST00000422344 ZHX3Q9H4I2 956 aa24.03■■□□□ 1.44
TRAF4-204ENST00000422344 MRPL17Q9NRX2 175 aaKnown RBP24.03■■□□□ 1.44
TRAF4-204ENST00000422344 MARCH5Q9NX47 278 aa24.03■■□□□ 1.44
TRAF4-204ENST00000422344 IRAK3Q9Y616 596 aa24.03■■□□□ 1.44
TRAF4-204ENST00000422344 CLASP2O75122 1294 aaKnown RBP24.02■■□□□ 1.44
TRAF4-204ENST00000422344 URODP06132 367 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 THP07101 528 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 YARSP54577 528 aaKnown RBP24.02■■□□□ 1.44
TRAF4-204ENST00000422344 PTPN14Q15678 1187 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 RRAGBQ5VZM2 374 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 TMEM184AQ6ZMB5 413 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 USP49Q70CQ1 688 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 TAS1R3Q7RTX0 852 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 ZBTB33Q86T24 672 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 MYCT1Q8N699 235 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 SPRYD3Q8NCJ5 442 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 TMEM161BQ8NDZ6 487 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 PRSS33Q8NF86 280 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 PHOX2BQ99453 314 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 HERC2P3Q9BVR0 1158 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 CDT1Q9H211 546 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 STK17AQ9UEE5 414 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 SSX2IPQ9Y2D8 614 aa24.02■■□□□ 1.44
TRAF4-204ENST00000422344 MORC2Q9Y6X9 1032 aaPredicted RBP24.02■■□□□ 1.44
TRAF4-204ENST00000422344 MYH11P35749 1972 aa24.02■■□□□ 1.43
TRAF4-204ENST00000422344 SOD2P04179 222 aa24.01■■□□□ 1.43
TRAF4-204ENST00000422344 MAPTP10636 758 aaKnown RBP24.01■■□□□ 1.43
TRAF4-204ENST00000422344 MCF2P10911 925 aa24.01■■□□□ 1.43
TRAF4-204ENST00000422344 DDIT3P35638 169 aa24.01■■□□□ 1.43
TRAF4-204ENST00000422344 NASPP49321 788 aaPredicted RBP24.01■■□□□ 1.43
TRAF4-204ENST00000422344 KIAA1841Q6NSI8 718 aa24.01■■□□□ 1.43
TRAF4-204ENST00000422344 ANKRD54Q6NXT1 300 aa24.01■■□□□ 1.43
TRAF4-204ENST00000422344 MPZL3Q6UWV2 235 aa24.01■■□□□ 1.43
TRAF4-204ENST00000422344 SUGP1Q8IWZ8 645 aaKnown RBP24.01■■□□□ 1.43
TRAF4-204ENST00000422344 LRRC15Q8TF66 581 aa24.01■■□□□ 1.43
TRAF4-204ENST00000422344 PARVGQ9HBI0 331 aa24.01■■□□□ 1.43
TRAF4-204ENST00000422344 TOPORSQ9NS56 1045 aaPredicted RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms