RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 EPHX3Q9H6B9 360 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 FNIP2Q9P278 1114 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 CCDC39Q9UFE4 941 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 USTQ9Y2C2 406 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 PRG3Q9Y2Y8 225 aaPredicted RBP9.5□□□□□ -0.89
MDC1-204ENST00000422266 ATG2AQ2TAZ0 1938 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 TOM1L1O75674 476 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 RECQL4O94761 1208 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 GLUD1P00367 558 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 CNPP09543 421 aaKnown RBP9.49□□□□□ -0.89
MDC1-204ENST00000422266 PLA2G4BP0C869 781 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 MCF2P10911 925 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 COL9A1P20849 921 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 CDC25AP30304 524 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 GRM5P41594 1212 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 CLCN4P51793 760 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 AFF1P51825 1210 aaKnown RBP9.49□□□□□ -0.89
MDC1-204ENST00000422266 SLC12A3P55017 1021 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 SF3A1Q15459 793 aaKnown RBP9.49□□□□□ -0.89
MDC1-204ENST00000422266 IL17AQ16552 155 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 ZNF568Q3ZCX4 644 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 TMEM119Q4V9L6 283 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 FUT10Q6P4F1 479 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 MPZL3Q6UWV2 235 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 ZPBP2Q6X784 338 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 RTL10Q7L3V2 364 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 TMEM173Q86WV6 379 aaPredicted RBP9.49□□□□□ -0.89
MDC1-204ENST00000422266 RNF135Q8IUD6 432 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 RNF168Q8IYW5 571 aaPredicted RBP9.49□□□□□ -0.89
MDC1-204ENST00000422266 VN1R2Q8NFZ6 395 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 BSNDQ8WZ55 320 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 STAMQ92783 540 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 ACSF2Q96CM8 615 aaPredicted RBP9.49□□□□□ -0.89
MDC1-204ENST00000422266 DDX27Q96GQ7 796 aaKnown RBP9.49□□□□□ -0.89
MDC1-204ENST00000422266 RPGRIP1Q96KN7 1286 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 MFSD14AQ96MC6 490 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 FBXL18Q96ME1 805 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 KLHL5Q96PQ7 755 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 TSPAN18Q96SJ8 248 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 ACO2Q99798 780 aaKnown RBP9.49□□□□□ -0.89
MDC1-204ENST00000422266 LRFN3Q9BTN0 628 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 MMTAG2Q9BU76 263 aaKnown RBP9.49□□□□□ -0.89
MDC1-204ENST00000422266 CCSER1Q9C0I3 900 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 KCNH6Q9H252 994 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 RXFP1Q9HBX9 757 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 CD320Q9NPF0 282 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 CHST7Q9NS84 486 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 SNTG2Q9NY99 539 aa9.49□□□□□ -0.89
MDC1-204ENST00000422266 MORC2Q9Y6X9 1032 aaPredicted RBP9.49□□□□□ -0.89
MDC1-204ENST00000422266 PP2D1A8MPX8 630 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 TMEM189-UBE2V1I3L0A0 370 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 CLDN3O15551 220 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 XPOTO43592 962 aaKnown RBP9.48□□□□□ -0.89
MDC1-204ENST00000422266 LILRB3O75022 631 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 TBCAO75347 108 aaKnown RBP9.48□□□□□ -0.89
MDC1-204ENST00000422266 BRD1O95696 1058 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 KRT18P05783 430 aaKnown RBP9.48□□□□□ -0.89
MDC1-204ENST00000422266 HSP90AA1P07900 732 aaKnown RBP9.48□□□□□ -0.89
MDC1-204ENST00000422266 KIAA0319Q5VV43 1072 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 DCLRE1AQ6PJP8 1040 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 CCDC149Q6ZUS6 474 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 ZBTB33Q86T24 672 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 CDR2LQ86X02 465 aaPredicted RBP9.48□□□□□ -0.89
MDC1-204ENST00000422266 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
MDC1-204ENST00000422266 GSTCDQ8NEC7 633 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 CMASQ8NFW8 434 aaPredicted RBP9.48□□□□□ -0.89
MDC1-204ENST00000422266 SLC22A17Q8WUG5 538 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 EDAQ92838 391 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 ACAP3Q96P50 834 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 TTPALQ9BTX7 342 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 RUSC1Q9BVN2 902 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 PLEKHA5Q9HAU0 1116 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 PARVGQ9HBI0 331 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 MARCH5Q9NX47 278 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 MIOSQ9NXC5 875 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 ZDHHC7Q9NXF8 308 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 KLK14Q9P0G3 267 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 STK17AQ9UEE5 414 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 GDAQ9Y2T3 454 aa9.48□□□□□ -0.89
MDC1-204ENST00000422266 BDP1A6H8Y1 2624 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 TDRD15B5MCY1 1934 aaKnown RBP9.47□□□□□ -0.89
MDC1-204ENST00000422266 C2CD2LO14523 706 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 SLC16A4O15374 487 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 TEX28O15482 410 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 B3GAT3O94766 335 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 FAM13AO94988 1023 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 EFEMP2O95967 443 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 EPCAMP16422 314 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 SYT1P21579 422 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 PAX3P23760 479 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 RPL9P32969 192 aaKnown RBP9.47□□□□□ -0.89
MDC1-204ENST00000422266 DDIT3P35638 169 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 NOLC1Q14978 699 aaKnown RBP eCLIP9.47□□□□□ -0.89
MDC1-204ENST00000422266 RARS2Q5T160 578 aaKnown RBP9.47□□□□□ -0.89
MDC1-204ENST00000422266 NT5DC1Q5TFE4 455 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
MDC1-204ENST00000422266 OTOP3Q7RTS5 596 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 GPR149Q86SP6 731 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 HSCBQ8IWL3 235 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 UBALD2Q8IYN6 164 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms