RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CT47A1Q5JQC4 288 aaPredicted RBP17.12■□□□□ 0.33
DDX55-203ENST00000421670 CRELD2Q6UXH1 353 aaPredicted RBP17.12■□□□□ 0.33
DDX55-203ENST00000421670 ECHDC2Q86YB7 292 aa17.12■□□□□ 0.33
DDX55-203ENST00000421670 CBWD2Q8IUF1 395 aa17.12■□□□□ 0.33
DDX55-203ENST00000421670 ZC3H3Q8IXZ2 948 aaKnown RBP17.12■□□□□ 0.33
DDX55-203ENST00000421670 RDH13Q8NBN7 331 aa17.12■□□□□ 0.33
DDX55-203ENST00000421670 EXTL3O43909 919 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 AKAP3O75969 853 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 RECQL4O94761 1208 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 BAIAP3O94812 1187 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 ADRB2P07550 413 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 CXCL8P10145 99 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 RPL13P26373 211 aaKnown RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 GRM5P41594 1212 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 FKBP3Q00688 224 aaKnown RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 MYL5Q02045 173 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 SNRNP35Q16560 246 aaKnown RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 TPD52L1Q16890 204 aaPredicted RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 HSP90AA4PQ58FG1 418 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 FOXR2Q6PJQ5 311 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 TMCO2Q7Z6W1 182 aaPredicted RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 TMEM174Q8WUU8 243 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 BPIFA3Q9BQP9 254 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 SRRTQ9BXP5 876 aaKnown RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 CXXC1Q9P0U4 656 aaPredicted RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 CPSF3Q9UKF6 684 aaKnown RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 NFE2L3Q9Y4A8 694 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 COL4A6Q14031 1691 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 TULP1O00294 542 aaPredicted RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 KIAA0391O15091 583 aaKnown RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 CETN3O15182 167 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 MEFVO15553 781 aaPredicted RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 ZNF623O75123 536 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 ENOX2Q16206 610 aaKnown RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 ZNF598Q86UK7 904 aaKnown RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 ENOX1Q8TC92 643 aaKnown RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 FBXL18Q96ME1 805 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
DDX55-203ENST00000421670 CBX8Q9HC52 389 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 KLK14Q9P0G3 267 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 PARP2Q9UGN5 583 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 FRMD4BQ9Y2L6 1034 aa17.11■□□□□ 0.33
DDX55-203ENST00000421670 KIAA1671Q9BY89 1806 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 EFCAB14O75071 495 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 UPP2O95045 317 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 LDHAP00338 332 aaKnown RBP17.1■□□□□ 0.33
DDX55-203ENST00000421670 FGFR1P11362 822 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 SKIP12755 728 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 ITGA4P13612 1032 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 KCNJ6P48051 423 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 FAM189BP81408 668 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 MYBPC2Q14324 1141 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 NCAPHQ15003 741 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 C9orf50Q5SZB4 431 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 SPATA1Q5VX52 437 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 AGMOQ6ZNB7 445 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 MRPL10Q7Z7H8 261 aaKnown RBP17.1■□□□□ 0.33
DDX55-203ENST00000421670 ACAP3Q96P50 834 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 CXCL16Q9H2A7 254 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 RNF19AQ9NV58 838 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 TMEM161AQ9NX61 479 aa17.1■□□□□ 0.33
DDX55-203ENST00000421670 RBAKQ9NYW8 714 aaPredicted RBP17.1■□□□□ 0.33
DDX55-203ENST00000421670 CLTAP09496 248 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 MLH1P40692 756 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 WNT7BP56706 349 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 MLLT1Q03111 559 aaPredicted RBP17.09■□□□□ 0.33
DDX55-203ENST00000421670 IQCB1Q15051 598 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 FAM43BQ6ZT52 329 aaPredicted RBP17.09■□□□□ 0.33
DDX55-203ENST00000421670 LUZP1Q86V48 1076 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 FAM186BQ8IYM0 893 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 HACE1Q8IYU2 909 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 FAM200AQ8TCP9 573 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 FAM212AQ96EL1 285 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 ZFP42Q96MM3 310 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 CEP63Q96MT8 703 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 RPF1Q9H9Y2 349 aaKnown RBP17.09■□□□□ 0.33
DDX55-203ENST00000421670 SAMSN1Q9NSI8 373 aaKnown RBP17.09■□□□□ 0.33
DDX55-203ENST00000421670 LRFN2Q9ULH4 789 aa17.09■□□□□ 0.33
DDX55-203ENST00000421670 CDH23Q9H251 3354 aa17.08■□□□□ 0.33
DDX55-203ENST00000421670 CHD9Q3L8U1 2897 aa17.08■□□□□ 0.33
DDX55-203ENST00000421670 ZNF233A6NK53 670 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 AMHP03971 560 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 PSMC2P35998 433 aaKnown RBP17.08■□□□□ 0.32
DDX55-203ENST00000421670 AFF1P51825 1210 aaKnown RBP17.08■□□□□ 0.32
DDX55-203ENST00000421670 YARSP54577 528 aaKnown RBP17.08■□□□□ 0.32
DDX55-203ENST00000421670 CYP24A1Q07973 514 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 KYAT1Q16773 422 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 SLC10A6Q3KNW5 377 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 CLLU1OSQ5K130 101 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 FAM117BQ6P1L5 589 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 NPAS4Q8IUM7 802 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 BRSK2Q8IWQ3 736 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 CRIPAKQ8N1N5 446 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 RNF214Q8ND24 703 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 HERVK_113Q902F9 699 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 PGBD4Q96DM1 585 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 SNX27Q96L92 541 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 GDF15Q99988 308 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 RSAD1Q9HA92 442 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms