RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 HDAC7Q8WUI4 952 aa10.4□□□□□ -0.74
SCRN1-204ENST00000421434 RPP25Q9BUL9 199 aaKnown RBP10.4□□□□□ -0.74
SCRN1-204ENST00000421434 TBC1D17Q9HA65 648 aa10.4□□□□□ -0.74
SCRN1-204ENST00000421434 GPRC5CQ9NQ84 441 aa10.4□□□□□ -0.74
SCRN1-204ENST00000421434 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.4□□□□□ -0.74
SCRN1-204ENST00000421434 FNIP2Q9P278 1114 aa10.4□□□□□ -0.74
SCRN1-204ENST00000421434 USP20Q9Y2K6 914 aa10.4□□□□□ -0.74
SCRN1-204ENST00000421434 SIT1Q9Y3P8 196 aa10.4□□□□□ -0.74
SCRN1-204ENST00000421434 R4GN57 208 aa10.4□□□□□ -0.74
SCRN1-204ENST00000421434 C2orf16Q68DN1 1984 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 STK36Q9NRP7 1315 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 CASTOR2A6NHX0 329 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 LRRIQ4A6NIV6 560 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 TTLL13PA6NNM8 815 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 BTBD18B2RXH4 712 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 WNT7AO00755 349 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 LYPLA2O95372 231 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 LIG1P18858 919 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 ATP2B1P20020 1258 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 FSHRP23945 695 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 NTHL1P78549 312 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 FOXK2Q01167 660 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 HSP90AA2PQ14568 343 aaPredicted RBP10.39□□□□□ -0.75
SCRN1-204ENST00000421434 RTP2Q5QGT7 225 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 FAM171A1Q5VUB5 890 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 GRASPQ7Z6J2 395 aaPredicted RBP10.39□□□□□ -0.75
SCRN1-204ENST00000421434 WASF1Q92558 559 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 TNFRSF25Q93038 417 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 NXPE3Q969Y0 559 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 CLSTN3Q9BQT9 956 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 RHOBTB2Q9BYZ6 727 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 BRMS1Q9HCU9 246 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 ZDHHC7Q9NXF8 308 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 POLIQ9UNA4 740 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 NUMBLQ9Y6R0 609 aa10.39□□□□□ -0.75
SCRN1-204ENST00000421434 FRYLO94915 3013 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 POTEMA6NI47 508 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 ANHXE9PGG2 379 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 NEMFO60524 1076 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 ZMYND10O75800 440 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 GPC5P78333 572 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 GRIK3Q13003 919 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 HTR4Q13639 388 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 TMEM132AQ24JP5 1023 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 DCLRE1AQ6PJP8 1040 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 PARM1Q6UWI2 310 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 MTMR9Q96QG7 549 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 TTPALQ9BTX7 342 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 NFKBIZQ9BYH8 718 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 FOXQ1Q9C009 403 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 CXCL16Q9H2A7 254 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 POLD4Q9HCU8 107 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 ARHGEF3Q9NR81 526 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 SNTG2Q9NY99 539 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 DENND4AQ7Z401 1863 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 DCHS1Q96JQ0 3298 aa10.38□□□□□ -0.75
SCRN1-204ENST00000421434 SF3B1O75533 1304 aaKnown RBP eCLIP10.37□□□□□ -0.75
SCRN1-204ENST00000421434 PTGESO14684 152 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 CCL16O15467 120 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 ADAM12O43184 909 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 LRRN2O75325 713 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 KIF4AO95239 1232 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 LMNAP02545 664 aaKnown RBP10.37□□□□□ -0.75
SCRN1-204ENST00000421434 THP07101 528 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 SPATA31C1P0DKV0 1188 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 XRCC6P12956 609 aaKnown RBP eCLIP10.37□□□□□ -0.75
SCRN1-204ENST00000421434 IGFBP6P24592 240 aaPredicted RBP10.37□□□□□ -0.75
SCRN1-204ENST00000421434 MCM7P33993 719 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 CREMQ03060 361 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 TUSC3Q13454 348 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 SNW1Q13573 536 aaKnown RBP10.37□□□□□ -0.75
SCRN1-204ENST00000421434 ME3Q16798 604 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 PPM1LQ5SGD2 360 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 CATSPER3Q86XQ3 398 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 NOSTRINQ8IVI9 506 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 KIAA2013Q8IYS2 634 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 LNX1Q8TBB1 728 aaPredicted RBP10.37□□□□□ -0.75
SCRN1-204ENST00000421434 FGF14Q92915 247 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 TMEM60Q9H2L4 133 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 FZD8Q9H461 694 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 PRMT7Q9NVM4 692 aaPredicted RBP10.37□□□□□ -0.75
SCRN1-204ENST00000421434 CDH7Q9ULB5 785 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 GDAQ9Y2T3 454 aa10.37□□□□□ -0.75
SCRN1-204ENST00000421434 GPR179Q6PRD1 2367 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 CACNA1IQ9P0X4 2223 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 JAK2O60674 1132 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 MED24O75448 989 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 RECQL4O94761 1208 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 LARGE1O95461 756 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 C1RP00736 705 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 C8AP07357 584 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 SP9P0CG40 484 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 GLULP15104 373 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 OR1D2P34982 312 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 PRPF4BQ13523 1007 aaKnown RBP10.36□□□□□ -0.75
SCRN1-204ENST00000421434 ANKRD1Q15327 319 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 PSMD5Q16401 504 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 LIN9Q5TKA1 542 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 PHLDB3Q6NSJ2 640 aa10.36□□□□□ -0.75
SCRN1-204ENST00000421434 C1orf210Q8IVY1 113 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms