RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 STRN3Q13033 797 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 TDRD10Q5VZ19 366 aaKnown RBP9.49□□□□□ -0.89
SNCA-206ENST00000420646 GPAT2Q6NUI2 795 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 DPY19L2Q6NUT2 758 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 FAM71AQ8IYT1 594 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 TXLNBQ8N3L3 684 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 USP38Q8NB14 1042 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 ALG3Q92685 438 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 RPGRIP1Q96KN7 1286 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 FBXL18Q96ME1 805 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 TIPINQ9BVW5 301 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 CELF4Q9BZC1 486 aaKnown RBP9.49□□□□□ -0.89
SNCA-206ENST00000420646 TMEM8AQ9HCN3 771 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 STIM2Q9P246 746 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 NOCTQ9UK39 431 aaKnown RBP9.49□□□□□ -0.89
SNCA-206ENST00000420646 ZBTB48P10074 688 aaPredicted RBP9.48□□□□□ -0.89
SNCA-206ENST00000420646 CYP11B1P15538 503 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 EDNRBP24530 442 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 ICAM3P32942 547 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 FMO1Q01740 532 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 KCTD2Q14681 263 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 MESDQ14696 234 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 C10orf76Q5T2E6 689 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 PASD1Q8IV76 773 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 RNF149Q8NC42 400 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 SPATA33Q96N06 139 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 MSTO1Q9BUK6 570 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 AMACRQ9UHK6 382 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 AGTPBP1Q9UPW5 1226 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 NOC2LQ9Y3T9 749 aaKnown RBP9.48□□□□□ -0.89
SNCA-206ENST00000420646 MYPNQ86TC9 1320 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 B4GALT5O43286 388 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 ARL2P36404 184 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 GGCXP38435 758 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 C1QTNF8P60827 252 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 RHPN2Q8IUC4 686 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 CEP120Q8N960 986 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 TSEN2Q8NCE0 465 aaKnown RBP9.48□□□□□ -0.89
SNCA-206ENST00000420646 CPA5Q8WXQ8 436 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 SEPT1Q8WYJ6 367 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 RFFLQ8WZ73 363 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 NLRP4Q96MN2 994 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 FNBP1Q96RU3 617 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 MMP19Q99542 508 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 TRIM31Q9BZY9 425 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 RNPEPQ9H4A4 650 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 RBAKQ9NYW8 714 aaPredicted RBP9.48□□□□□ -0.89
SNCA-206ENST00000420646 ALG6Q9Y672 507 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 PTPRFP10586 1907 aa9.48□□□□□ -0.89
SNCA-206ENST00000420646 IGKV6D-21A0A0A0MT36 114 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 TARSL2A2RTX5 802 aaKnown RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 ZBTB42B2RXF5 422 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 STAM2O75886 525 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 VNN1O95497 513 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 CST3P01034 146 aaPredicted RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 FGGP02679 453 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 TMEM253P0C7T8 217 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 TXNP10599 105 aaKnown RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 CLCN3P51790 818 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 ZNF394Q53GI3 561 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 METTL7BQ6UX53 244 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 SHC3Q92529 594 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 NT5C1BQ96P26 610 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 GPR20Q99678 358 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 APOBEC3GQ9HC16 384 aaKnown RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 HPCAL4Q9UM19 191 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 STXBP5LQ9Y2K9 1186 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 WDR90Q96KV7 1748 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 ANKRD62A6NC57 917 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 DKC1O60832 514 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNCA-206ENST00000420646 TARBP2Q15633 366 aaKnown RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 SLFN11Q7Z7L1 901 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 DHX37Q8IY37 1157 aaKnown RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 CASKIN2Q8WXE0 1202 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 PSPC1Q8WXF1 523 aaKnown RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 AZI2Q9H6S1 392 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 C17orf75Q9HAS0 396 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 AMFRQ9UKV5 643 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 OTOFQ9HC10 1997 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 ZC3H4Q9UPT8 1303 aaKnown RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 BTNL10A8MVZ5 291 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 AGPSO00116 658 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 KRIT1O00522 736 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 ATP8B1O43520 1251 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 EXTL3O43909 919 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 GJB6O95452 261 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 SYF2O95926 243 aaKnown RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 HLA-DRAP01903 254 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 IQCF3P0C7M6 154 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 GPC3P51654 580 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 MFAP3P55082 362 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 ERVK-9P63128 1117 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 DMTNQ08495 405 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 NEDD9Q14511 834 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 ZNF572Q7Z3I7 529 aaPredicted RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 TMEM192Q8IY95 271 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 AENQ8WTP8 325 aaKnown RBP9.47□□□□□ -0.89
SNCA-206ENST00000420646 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 HES6Q96HZ4 224 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 MINDY3Q9H8M7 445 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms