RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TMEM40Q8WWA1 233 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 WNT8BQ93098 351 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 VTI1AQ96AJ9 217 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 SCLT1Q96NL6 688 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 ADPGKQ9BRR6 497 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 FAM213AQ9BRX8 229 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 PLEKHA5Q9HAU0 1116 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 CDY2AQ9Y6F7 541 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 A0A1W2PPC1 479 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 GPR182O15218 404 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 B4GALT4O60513 344 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 IL18RAPO95256 599 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 CLTAP09496 248 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 GRM5P41594 1212 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 FMO5P49326 533 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 KCNMA1Q12791 1236 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 CETN1Q12798 172 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 SYCP1Q15431 976 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 ZNF568Q3ZCX4 644 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 DPY19L2P1Q6NXN4 242 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 TRAF7Q6Q0C0 670 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 CATSPER4Q7RTX7 472 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 NT5DC4Q86YG4 428 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 CCDC155Q8N6L0 562 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 CCDC150Q8NCX0 1101 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 ZSWIM2Q8NEG5 633 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 PLEKHO2Q8TD55 490 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 SAAL1Q96ER3 474 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 TCHPQ9BT92 498 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 ASB7Q9H672 318 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 TMEM8AQ9HCN3 771 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 TRMT13Q9NUP7 481 aaKnown RBP15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 RBAKQ9NYW8 714 aaPredicted RBP15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 ANKFY1Q9P2R3 1169 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 CAPN11Q9UMQ6 739 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 ALPK3Q96L96 1907 aa15.48■□□□□ 0.07
SHMT1P1-201ENST00000419974 PARNO95453 639 aaKnown RBP15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 MYCNP04198 464 aaPredicted RBP15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 RFX1P22670 979 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 FECHP22830 423 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 BMP8BP34820 402 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 EXOC3L4Q17RC7 722 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 FBXO47Q5MNV8 452 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 EEF1DP3Q658K8 133 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 KRT39Q6A163 491 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 GBP6Q6ZN66 633 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 TMC6Q7Z403 805 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 FAM228AQ86W67 206 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 WDR49Q8IV35 697 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 CNGA4Q8IV77 575 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 DRC7Q8IY82 874 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 RDH13Q8NBN7 331 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 MYO6Q9UM54 1294 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 NOD1Q9Y239 953 aa15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.47■□□□□ 0.07
SHMT1P1-201ENST00000419974 GOLGA8IPA6NC78 632 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 GOLGA8JA6NMD2 632 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 LRRIQ3A6PVS8 624 aaPredicted RBP15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 ZC3H11AO75152 810 aaKnown RBP eCLIP15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 GYPCP04921 128 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 TPM1P09493 284 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 CKBP12277 381 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 THPOP40225 353 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 ACOT2P49753 483 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 FXR1P51114 621 aaKnown RBP eCLIP15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 PPP3CAQ08209 521 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 TMEM62Q0P6H9 643 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 BFSP2Q13515 415 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 DCAF17Q5H9S7 520 aaPredicted RBP15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 SLC39A5Q6ZMH5 540 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 CCDC186Q7Z3E2 898 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 LMO3Q8TAP4 145 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 PPP1R13LQ8WUF5 828 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 FAXDC2Q96IV6 333 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 ZNF668Q96K58 619 aaPredicted RBP15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 PANX2Q96RD6 677 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 CGRRF1Q99675 332 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 NUCKS1Q9H1E3 243 aaKnown RBP15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 TMX1Q9H3N1 280 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 DERAQ9Y315 318 aa15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 NOC2LQ9Y3T9 749 aaKnown RBP15.46■□□□□ 0.07
SHMT1P1-201ENST00000419974 TRIOBPQ9H2D6 2365 aa15.46■□□□□ 0.06
SHMT1P1-201ENST00000419974 TTC26A0AVF1 554 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZNF623O75123 536 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 RPS6KA5O75582 802 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 C4BPAP04003 597 aaKnown RBP15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 PON1P27169 355 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 HNRNPH3P31942 346 aaKnown RBP15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 MATR3P43243 847 aaKnown RBP eCLIP15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 DLG4P78352 724 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 ENOX2Q16206 610 aaKnown RBP15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZACNQ401N2 412 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 CBWD6Q4V339 395 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 EPC2Q52LR7 807 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 XKR4Q5GH76 650 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 CBWD3Q5JTY5 395 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 CBWD5Q5RIA9 395 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 TCERG1LQ5VWI1 586 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 PPFIBP1Q86W92 1011 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms