RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 LMBRD2Q68DH5 695 aaPredicted RBP5.84□□□□□ -1.48
VPS13A-207ENST00000419472 MOGAT3Q86VF5 341 aa5.84□□□□□ -1.48
VPS13A-207ENST00000419472 PLD6Q8N2A8 252 aaKnown RBP5.84□□□□□ -1.48
VPS13A-207ENST00000419472 STYXQ8WUJ0 223 aa5.84□□□□□ -1.48
VPS13A-207ENST00000419472 HTRA1Q92743 480 aa5.84□□□□□ -1.48
VPS13A-207ENST00000419472 RAX2Q96IS3 184 aa5.84□□□□□ -1.48
VPS13A-207ENST00000419472 STK33Q9BYT3 514 aa5.84□□□□□ -1.48
VPS13A-207ENST00000419472 TCFL5Q9UL49 500 aa5.84□□□□□ -1.48
VPS13A-207ENST00000419472 GPR34Q9UPC5 381 aa5.84□□□□□ -1.48
VPS13A-207ENST00000419472 FRMD4BQ9Y2L6 1034 aa5.84□□□□□ -1.48
VPS13A-207ENST00000419472 ATP23Q9Y6H3 246 aa5.84□□□□□ -1.48
VPS13A-207ENST00000419472 UGGT1Q9NYU2 1555 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 SLIT1O75093 1534 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 A0A1W2PPH5 198 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 A0A1W2PPL8 197 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 TERTO14746 1132 aaKnown RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 PHGDHO43175 533 aaKnown RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 PLOD3O60568 738 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 CLASP2O75122 1294 aaKnown RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 NPR1P16066 1061 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 AFMP43652 599 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 MEA1Q16626 185 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 PHYKPLQ8IUZ5 450 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 USHBP1Q8N6Y0 703 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 ZMAT2Q96NC0 199 aaKnown RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 MPHOSPH9Q99550 1183 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 DHX36Q9H2U1 1008 aaKnown RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 CEP72Q9P209 647 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 PCDHA3Q9Y5H8 950 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 HFM1A2PYH4 1435 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 PIK3C2BO00750 1634 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 TONSLQ96HA7 1378 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 ANKRD18BA2A2Z9 1011 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 BUB1BO60566 1050 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 MMEP08473 750 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 PTPN1P18031 435 aaKnown RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 FGFR2P21802 821 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 XPAP23025 273 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 NOGQ13253 232 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 SPARCL1Q14515 664 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 SULT6B1Q6IMI4 303 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 SLCO4C1Q6ZQN7 724 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 CHSY3Q70JA7 882 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 SNX32Q86XE0 403 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 FOXRED1Q96CU9 486 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 MAELQ96JY0 434 aaKnown RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 TTC14Q96N46 770 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 DUSP23Q9BVJ7 150 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 PNNQ9H307 717 aaKnown RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 RC3H2Q9HBD1 1191 aaKnown RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 ZCCHC17Q9NP64 241 aaKnown RBP5.83□□□□□ -1.48
VPS13A-207ENST00000419472 RIC8BQ9NVN3 520 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 ZSWIM5Q9P217 1185 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 KIF17Q9P2E2 1029 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 MAN2B2Q9Y2E5 1009 aa5.83□□□□□ -1.48
VPS13A-207ENST00000419472 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-207ENST00000419472 PRAMEF25A6NGN4 478 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 PCDH8O95206 1070 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 NDST3O95803 873 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 AOAHP28039 575 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 IL12RB1P42701 662 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 HTRA4P83105 476 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-207ENST00000419472 MAP3K12Q12852 859 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 HAUS3Q68CZ6 603 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 COLGALT2Q8IYK4 626 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 TUBGCP5Q96RT8 1024 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 VRK1Q99986 396 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-207ENST00000419472 SDF4Q9BRK5 362 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 COL20A1Q9P218 1284 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 PRSS50Q9UI38 385 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 NOS1P29475 1434 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 SYNMO15061 1565 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 NEURL4Q96JN8 1562 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 ADGRB3O60242 1522 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 ARHGAP23Q9P227 1491 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-207ENST00000419472 C22orf46C9J442 243 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 HOXC11O43248 304 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-207ENST00000419472 TADA3O75528 432 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 GSPT1P15170 499 aaKnown RBP5.82□□□□□ -1.48
VPS13A-207ENST00000419472 CYP7A1P22680 504 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 NKX6-1P78426 367 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-207ENST00000419472 PPP3CAQ08209 521 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 ADAM9Q13443 819 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 FGL2Q14314 439 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 KRT32Q14532 448 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 SMAD1Q15797 465 aaKnown RBP5.82□□□□□ -1.48
VPS13A-207ENST00000419472 PRAMEF9Q5VWM5 478 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 TMCO3Q6UWJ1 677 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 STT3BQ8TCJ2 826 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 HDAC10Q969S8 669 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 HELLSQ9NRZ9 838 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 OLA1Q9NTK5 396 aaKnown RBP5.82□□□□□ -1.48
VPS13A-207ENST00000419472 IRAK4Q9NWZ3 460 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 IGSF9Q9P2J2 1179 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 GIMAP2Q9UG22 337 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 PCDHA6Q9UN73 950 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 SIK3Q9Y2K2 1263 aa5.82□□□□□ -1.48
VPS13A-207ENST00000419472 IQGAP1P46940 1657 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 GOLGA6L3A6NEY3 463 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms