RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 FAM26FQ5R3K3 315 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 ALKAL1Q6UXT8 129 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 URGCPQ8TCY9 931 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 HPS3Q969F9 1004 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 APOL6Q9BWW8 343 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 CXCL16Q9H2A7 254 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 TBC1D7Q9P0N9 293 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 KANSL3Q9P2N6 904 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 PLAGL2Q9UPG8 496 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 INPP5FQ9Y2H2 1132 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 A0A0B4J269 797 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 GADD45BO75293 160 aaPredicted RBP20.41■□□□□ 0.86
PTCD3-204ENST00000418628 GCNT3O95395 438 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 ITGB1P05556 798 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 HOXD13P35453 343 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 LIG4P49917 911 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 SCNN1GP51170 649 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 DPYDQ12882 1025 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 GRIK3Q13003 919 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 KCNT2Q6UVM3 1135 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 ZNF280BQ86YH2 543 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 GAS2L1Q99501 681 aaPredicted RBP20.41■□□□□ 0.86
PTCD3-204ENST00000418628 IKZF4Q9H2S9 585 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 LMCD1Q9NZU5 365 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 ANKFY1Q9P2R3 1169 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 MTCH2Q9Y6C9 303 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 UBE4BO95155 1302 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 PLXNA3P51805 1871 aa20.41■□□□□ 0.86
PTCD3-204ENST00000418628 TISP43B9A030 160 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 ANKRD63C9JTQ0 380 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 DDHD2O94830 711 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 SLC34A2O95436 690 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 FOSL2P15408 326 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 GPM6BQ13491 265 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 CAMK1Q14012 370 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 BMT2Q1RMZ1 405 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 COLGALT2Q8IYK4 626 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 SLC39A11Q8N1S5 342 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 KLHL23Q8NBE8 558 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 BICD1Q96G01 975 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 SNX27Q96L92 541 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 TIGD1Q96MW7 591 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 TMEM175Q9BSA9 504 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 LMAN2LQ9H0V9 348 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 AAASQ9NRG9 546 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 DNAJB4Q9UDY4 337 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 PCDHB13Q9Y5F0 798 aa20.4■□□□□ 0.86
PTCD3-204ENST00000418628 CARNS1A5YM72 827 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 GOLGA6L4A6NEF3 574 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 GRM6O15303 877 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 CLDN3O15551 220 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 POMCP01189 267 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 ADRB2P07550 413 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 ADSSP30520 456 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 PPM1AP35813 382 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 BCAR1P56945 870 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 PLCB3Q01970 1234 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 ZBTB33Q86T24 672 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 TMEM173Q86WV6 379 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-204ENST00000418628 KIAA0895Q8NCT3 520 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 ZNF507Q8TCN5 953 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 SPPL3Q8TCT6 385 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 ZNF558Q96NG5 402 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 ACCSQ96QU6 501 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 KLK14Q9P0G3 267 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 PARP2Q9UGN5 583 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 GDAQ9Y2T3 454 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 PCDHB12Q9Y5F1 795 aa20.39■□□□□ 0.85
PTCD3-204ENST00000418628 ZC3H11AO75152 810 aaKnown RBP eCLIP20.38■□□□□ 0.85
PTCD3-204ENST00000418628 PRPF6O94906 941 aaKnown RBP20.38■□□□□ 0.85
PTCD3-204ENST00000418628 EFEMP2O95967 443 aa20.38■□□□□ 0.85
PTCD3-204ENST00000418628 GALTP07902 379 aa20.38■□□□□ 0.85
PTCD3-204ENST00000418628 DNAJB1P25685 340 aa20.38■□□□□ 0.85
PTCD3-204ENST00000418628 PBX3P40426 434 aa20.38■□□□□ 0.85
PTCD3-204ENST00000418628 UBE3AQ05086 875 aa20.38■□□□□ 0.85
PTCD3-204ENST00000418628 KMT5BQ4FZB7 885 aa20.38■□□□□ 0.85
PTCD3-204ENST00000418628 ELOA2Q8IYF1 753 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-204ENST00000418628 BCL7CQ8WUZ0 217 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-204ENST00000418628 SCFD1Q8WVM8 642 aa20.38■□□□□ 0.85
PTCD3-204ENST00000418628 MRPL38Q96DV4 380 aaKnown RBP20.38■□□□□ 0.85
PTCD3-204ENST00000418628 PPP1R10Q96QC0 940 aaKnown RBP20.38■□□□□ 0.85
PTCD3-204ENST00000418628 CCDC94Q9BW85 323 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-204ENST00000418628 CNTN3Q9P232 1028 aa20.38■□□□□ 0.85
PTCD3-204ENST00000418628 EXOC7Q9UPT5 735 aa20.38■□□□□ 0.85
PTCD3-204ENST00000418628 LZTS1Q9Y250 596 aa20.38■□□□□ 0.85
PTCD3-204ENST00000418628 SPTBN5Q9NRC6 3674 aaKnown RBP20.38■□□□□ 0.85
PTCD3-204ENST00000418628 OGTO15294 1046 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 NR1I2O75469 434 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 FGF18O76093 207 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 RHOBTB3O94955 611 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 SLC11A1P49279 550 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 TPRNQ4KMQ1 711 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 ZBTB41Q5SVQ8 909 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 SPOUT1Q5T280 376 aaKnown RBP20.37■□□□□ 0.85
PTCD3-204ENST00000418628 KANK3Q6NY19 840 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 THNSL1Q8IYQ7 743 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 SPATA20Q8TB22 786 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 TCHPQ9BT92 498 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 TMEM206Q9H813 350 aa20.37■□□□□ 0.85
PTCD3-204ENST00000418628 MARCH5Q9NX47 278 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms