RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 TP73O15350 636 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 P4HA2O15460 535 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 GZMAP12544 262 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 KRT5P13647 590 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 CREB1P16220 341 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 SSTR3P32745 418 aaPredicted RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 MFAP3P55082 362 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 TNIP1Q15025 636 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 PPP1R7Q15435 360 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 LONRF1Q17RB8 773 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 ANKRD20A8PQ5CZ79 823 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 LMBRD2Q68DH5 695 aaPredicted RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 RSBN1LQ6PCB5 846 aaPredicted RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 OGFOD1Q8N543 542 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 ATXN2LQ8WWM7 1075 aaKnown RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 BSNDQ8WZ55 320 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 PGM2Q96G03 612 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 PWWP2AQ96N64 755 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 ZNF317Q96PQ6 595 aaPredicted RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 HERPUD2Q9BSE4 406 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 CNOT10Q9H9A5 744 aaKnown RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 SLC40A1Q9NP59 571 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 HAUS2Q9NVX0 235 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 TBX20Q9UMR3 447 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 TESPA1A2RU30 521 aaPredicted RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 GRIN3BO60391 1043 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 IBSPP21815 317 aaPredicted RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 NPTX2P47972 431 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 RPS6P62753 249 aaKnown RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 LRRC14Q15048 493 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 KRT39Q6A163 491 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 RNF207Q6ZRF8 634 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 LRRC34Q8IZ02 419 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 TMEM161BQ8NDZ6 487 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 SYTL5Q8TDW5 730 aaPredicted RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 CHST7Q9NS84 486 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 KLC4Q9NSK0 619 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 MTRF1LQ9UGC7 380 aaKnown RBP15.53■□□□□ 0.08
HDAC9-208ENST00000417496 UBIAD1Q9Y5Z9 338 aa15.53■□□□□ 0.08
HDAC9-208ENST00000417496 DENND3A2RUS2 1198 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 CYP1A2P05177 515 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 VPS41P49754 854 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 RWDD2BP57060 319 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 SP4Q02446 784 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 ANO5Q75V66 913 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 C12orf56Q8IXR9 622 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 MGARPQ8TDB4 240 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 CPA5Q8WXQ8 436 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 DDX1Q92499 740 aaKnown RBP15.52■□□□□ 0.08
HDAC9-208ENST00000417496 ART4Q93070 314 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 MLXIPLQ9NP71 852 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 INTS9Q9NV88 658 aaKnown RBP15.52■□□□□ 0.08
HDAC9-208ENST00000417496 MTUS1Q9ULD2 1270 aa15.52■□□□□ 0.08
HDAC9-208ENST00000417496 O00370 1275 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 RASGRF2O14827 1237 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 RASSF9O75901 435 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 CHKAP35790 457 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 SCTRP47872 440 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 PDE6CP51160 858 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 CDR2Q01850 454 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 AUHQ13825 339 aaKnown RBP15.52■□□□□ 0.07
HDAC9-208ENST00000417496 SPDYCQ5MJ68 293 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 SLC39A4Q6P5W5 647 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 SV2AQ7L0J3 742 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 CNKSR1Q969H4 720 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 RAB20Q9NX57 234 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 GGT7Q9UJ14 662 aa15.52■□□□□ 0.07
HDAC9-208ENST00000417496 MAPTP10636 758 aaKnown RBP15.51■□□□□ 0.07
HDAC9-208ENST00000417496 SMTNP53814 917 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 TCEAL1Q15170 157 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 SPDYE2Q495Y8 402 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 POMGNT1Q8WZA1 660 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 CCT6BQ92526 530 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 ELAC2Q9BQ52 826 aaKnown RBP15.51■□□□□ 0.07
HDAC9-208ENST00000417496 AAASQ9NRG9 546 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 CTNNAL1Q9UBT7 734 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 ANAPC7Q9UJX3 599 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 GTF3C4Q9UKN8 822 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 ECEL1O95672 775 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 VIMP08670 466 aaKnown RBP15.51■□□□□ 0.07
HDAC9-208ENST00000417496 RARGP13631 454 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 HSPA6P17066 643 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 NCKAP1LP55160 1127 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 KRT17Q04695 432 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 PDE4CQ08493 712 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 ALCAMQ13740 583 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 PGM5Q15124 567 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 CLUL1Q15846 466 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 CYP1B1Q16678 543 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 SGO2Q562F6 1265 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 C6orf118Q5T5N4 469 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 PCNX4Q63HM2 1172 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 C3orf20Q8ND61 904 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 FBXL13Q8NEE6 735 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 PSPC1Q8WXF1 523 aaKnown RBP15.51■□□□□ 0.07
HDAC9-208ENST00000417496 HEMGNQ9BXL5 484 aa15.51■□□□□ 0.07
HDAC9-208ENST00000417496 CDC42EP4Q9H3Q1 356 aaKnown RBP15.51■□□□□ 0.07
HDAC9-208ENST00000417496 TCEAL9Q9UHQ7 104 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms