RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 PRPF4BQ13523 1007 aaKnown RBP17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 GNL2Q13823 731 aaKnown RBP17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 FAM187BQ17R55 369 aa17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 USP41Q3LFD5 358 aa17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 CMASQ8NFW8 434 aaPredicted RBP17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 ERMNQ8TAM6 284 aa17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 RSAD2Q8WXG1 361 aa17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 ZNF707Q96C28 371 aaPredicted RBP17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 PRIMPOLQ96LW4 560 aa17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 CCDC113Q9H0I3 377 aa17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 KCNK12Q9HB15 430 aa17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 VPS13AQ96RL7 3174 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 PTGESO14684 152 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 N4BP3O15049 544 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 RECQL4O94761 1208 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 RBM25P49756 843 aaKnown RBP17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 TOB1P50616 345 aaPredicted RBP17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 TUSC3Q13454 348 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 HSP90AA2PQ14568 343 aaPredicted RBP17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 MAPK6Q16659 721 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 RTP2Q5QGT7 225 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 FAM184AQ8NB25 1140 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 ST13P5Q8NFI4 369 aaPredicted RBP17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 DEPTORQ8TB45 409 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 SMG7Q92540 1137 aaKnown RBP17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 ATOH1Q92858 354 aaPredicted RBP17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 MYADMQ96S97 322 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 C2orf40Q9H1Z8 148 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 BHMT2Q9H2M3 363 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 GDAQ9Y2T3 454 aa17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 ZFHX2Q9C0A1 2572 aaPredicted RBP17.22■□□□□ 0.35
RHBDF1-202ENST00000417043 ACKR2O00590 384 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 NARSO43776 548 aaKnown RBP17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 EIF5BO60841 1220 aaKnown RBP17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 KIF4AO95239 1232 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 GBP2P32456 591 aaPredicted RBP17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 TDGQ13569 410 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 NAB2Q15742 525 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 NT5DC1Q5TFE4 455 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 LILRA6Q6PI73 481 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 CEP57Q86XR8 500 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 NT5C3AQ9H0P0 336 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 MFSD1Q9H3U5 465 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 WDR6Q9NNW5 1121 aaKnown RBP17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 FNIP2Q9P278 1114 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 LRWD1Q9UFC0 647 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 KIAA1024Q9UPX6 916 aa17.21■□□□□ 0.35
RHBDF1-202ENST00000417043 CFAP54Q96N23 3096 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 VWA8A3KMH1 1905 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 GALR2O43603 387 aaPredicted RBP17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 PI15O43692 258 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 THP07101 528 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 CDC25AP30304 524 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 NAMPTP43490 491 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 FXR2P51116 673 aaKnown RBP eCLIP17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 HMGN5P82970 282 aaKnown RBP17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 PTGDRQ13258 359 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 ORC2Q13416 577 aaPredicted RBP17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 FAM171A1Q5VUB5 890 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 ASTLQ6HA08 431 aaPredicted RBP17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 FLCNQ8NFG4 579 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 ZSCAN31Q96LW9 406 aaPredicted RBP17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 PIDD1Q9HB75 910 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 DDX19AQ9NUU7 478 aaKnown RBP17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 PCDHB6Q9Y5E3 794 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 CLUHO75153 1309 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 MYO15AQ9UKN7 3530 aa17.2■□□□□ 0.34
RHBDF1-202ENST00000417043 ZMYM2Q9UBW7 1377 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 E9PMD0 336 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 ADAM12O43184 909 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 NPR3P17342 541 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 IL17AQ16552 155 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 GLRA4Q5JXX5 417 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 HAUS3Q68CZ6 603 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 LNX1Q8TBB1 728 aaPredicted RBP17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 IFT74Q96LB3 600 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 CLSTN3Q9BQT9 956 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 ADPGKQ9BRR6 497 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 PLEKHA4Q9H4M7 779 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 DPP7Q9UHL4 492 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 NOL7Q9UMY1 257 aaKnown RBP17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 DUSP12Q9UNI6 340 aa17.19■□□□□ 0.34
RHBDF1-202ENST00000417043 SF3B1O75533 1304 aaKnown RBP eCLIP17.19■□□□□ 0.348e-8■■■■■ 117.2
RHBDF1-202ENST00000417043 U2AF2P26368 475 aaKnown RBP eCLIP17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 TRAPPC10P48553 1259 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 PPP2R5AQ15172 486 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 C8orf34Q49A92 452 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 CWF19L1Q69YN2 538 aaKnown RBP17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 ELMSAN1Q6PJG2 1045 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 GPR65Q8IYL9 337 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 SIX5Q8N196 739 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 SNX29Q8TEQ0 813 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 HDAC7Q8WUI4 952 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 STAMQ92783 540 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 TTPALQ9BTX7 342 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 PRKD2Q9BZL6 878 aa17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 SH2B1Q9NRF2 756 aaPredicted RBP17.18■□□□□ 0.34
RHBDF1-202ENST00000417043 FBXL21Q9UKT6 434 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms