RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 TRIM6Q9C030 488 aaPredicted RBP10.6□□□□□ -0.71
LINC01090-201ENST00000415357 CCDC113Q9H0I3 377 aa10.6□□□□□ -0.71
LINC01090-201ENST00000415357 ENTPD7Q9NQZ7 604 aa10.6□□□□□ -0.71
LINC01090-201ENST00000415357 TLR9Q9NR96 1032 aa10.6□□□□□ -0.71
LINC01090-201ENST00000415357 PRMT7Q9NVM4 692 aaPredicted RBP10.6□□□□□ -0.71
LINC01090-201ENST00000415357 SPG21Q9NZD8 308 aa10.6□□□□□ -0.71
LINC01090-201ENST00000415357 MTMR6Q9Y217 621 aa10.6□□□□□ -0.71
LINC01090-201ENST00000415357 CNTNAP2Q9UHC6 1331 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 HIDE1A8MVS5 230 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 FSCN2O14926 492 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 TBX10O75333 385 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 DDHD2O94830 711 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 IL9P15248 144 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 AKAP5P24588 427 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 MARCKSP29966 332 aaPredicted RBP10.59□□□□□ -0.71
LINC01090-201ENST00000415357 PPM1AP35813 382 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 SLC11A1P49279 550 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 SCNN1GP51170 649 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 PEX3P56589 373 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 CEBPZQ03701 1054 aaKnown RBP10.59□□□□□ -0.71
LINC01090-201ENST00000415357 UBE3AQ05086 875 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 NCBP1Q09161 790 aaKnown RBP10.59□□□□□ -0.71
LINC01090-201ENST00000415357 PCBP1Q15365 356 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC01090-201ENST00000415357 TMEM132AQ24JP5 1023 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 CTC1Q2NKJ3 1217 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 LEXMQ3ZCV2 418 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 TMEM119Q4V9L6 283 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 SPECC1Q5M775 1068 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 EEF1DP3Q658K8 133 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 DESI1Q6ICB0 168 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 RINT1Q6NUQ1 792 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 SLC27A1Q6PCB7 646 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 C1orf186Q6ZWK4 172 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 HSCBQ8IWL3 235 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 URGCPQ8TCY9 931 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 KIFAP3Q92845 792 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 SNX21Q969T3 373 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 CDK5RAP3Q96JB5 506 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 IFT74Q96LB3 600 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 ZFP42Q96MM3 310 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 GAD1Q99259 594 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 TCF25Q9BQ70 676 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 C2orf40Q9H1Z8 148 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 FZD8Q9H461 694 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 PDZD7Q9H5P4 517 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 MIOSQ9NXC5 875 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 KLK14Q9P0G3 267 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 C5orf42Q9H799 3197 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 TTC28Q96AY4 2481 aa10.59□□□□□ -0.71
LINC01090-201ENST00000415357 NPHP3-ACAD11A0A0J9YXS1 232 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 A0A1B0GUA9 196 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 ARL5CA6NH57 179 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 CCDC169A6NNP5 214 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 SFI1A8K8P3 1242 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 STX6O43752 255 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 AP1G2O75843 785 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 GLP2RO95838 553 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 BMP15O95972 392 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 GALTP07902 379 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 PLA2G4BP0C869 781 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 CA8P35219 290 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 NPTX2P47972 431 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 ALDH7A1P49419 539 aaKnown RBP10.58□□□□□ -0.72
LINC01090-201ENST00000415357 NDUFV1P49821 464 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 SLC12A3P55017 1021 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 PRPF4BQ13523 1007 aaKnown RBP10.58□□□□□ -0.72
LINC01090-201ENST00000415357 DHX8Q14562 1220 aaKnown RBP10.58□□□□□ -0.72
LINC01090-201ENST00000415357 KARSQ15046 597 aaKnown RBP10.58□□□□□ -0.72
LINC01090-201ENST00000415357 PPP2R5AQ15172 486 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 PTPAQ15257 358 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 MAPK6Q16659 721 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 PTPRNQ16849 979 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 FAM187BQ17R55 369 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 NT5DC1Q5TFE4 455 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 FOXD4L5Q5VV16 416 aaPredicted RBP10.58□□□□□ -0.72
LINC01090-201ENST00000415357 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
LINC01090-201ENST00000415357 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 TMC7Q7Z402 723 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 SYT2Q8N9I0 419 aaPredicted RBP10.58□□□□□ -0.72
LINC01090-201ENST00000415357 CNNM3Q8NE01 707 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 VN1R2Q8NFZ6 395 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 FOXD4L4Q8WXT5 416 aaPredicted RBP10.58□□□□□ -0.72
LINC01090-201ENST00000415357 AUTS2Q8WXX7 1259 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 TMEM169Q96HH4 297 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 PRIMPOLQ96LW4 560 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 USP28Q96RU2 1077 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 VN1R3Q9BXE9 311 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 PRKD2Q9BZL6 878 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 TLE6Q9H808 572 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 BARX2Q9UMQ3 279 aaPredicted RBP10.58□□□□□ -0.72
LINC01090-201ENST00000415357 LZTS1Q9Y250 596 aa10.58□□□□□ -0.72
LINC01090-201ENST00000415357 PRG3Q9Y2Y8 225 aaPredicted RBP10.58□□□□□ -0.72
LINC01090-201ENST00000415357 F8W810 466 aa10.57□□□□□ -0.72
LINC01090-201ENST00000415357 ACKR2O00590 384 aa10.57□□□□□ -0.72
LINC01090-201ENST00000415357 N4BP3O15049 544 aa10.57□□□□□ -0.72
LINC01090-201ENST00000415357 SLC16A4O15374 487 aa10.57□□□□□ -0.72
LINC01090-201ENST00000415357 CCNYL3P0C7X3 344 aa10.57□□□□□ -0.72
LINC01090-201ENST00000415357 PLCG1P19174 1290 aa10.57□□□□□ -0.72
LINC01090-201ENST00000415357 GUCY2CP25092 1073 aa10.57□□□□□ -0.72
LINC01090-201ENST00000415357 UBA7P41226 1012 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms