RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 MAPRE3Q9UPY8 281 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 MAPK8IP1Q9UQF2 711 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 TLR6Q9Y2C9 796 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CARD8Q9Y2G2 431 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 R3HCC1Q9Y3T6 440 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 SPO11Q9Y5K1 396 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CAPN6Q9Y6Q1 641 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 KANK1Q14678 1352 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 GSG1L2A8MUP6 293 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 B4E171 279 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 F6X3S4 739 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 ABLIM1O14639 778 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 TTI1O43156 1089 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 BRINP1O60477 761 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 DGKIO75912 1065 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CPP00450 1065 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 OPN1MWP04001 364 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 PYGLP06737 847 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 ADRB1P08588 477 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 RPSAP08865 295 aaKnown RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 OPN1MW2P0DN77 364 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 OPN1MW3P0DN78 364 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 PRLRP16471 622 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 HDCP19113 662 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 TFEBP19484 476 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 POLR2BP30876 1174 aaKnown RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 PRKAR1BP31321 381 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 HNF4AP41235 474 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 KCNJ6P48051 423 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 SOX9P48436 509 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 NR2C2P49116 596 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 MCM2P49736 904 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CDR1P51861 262 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CCNHP51946 323 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 ATXN1P54253 815 aaKnown RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 PMS1P54277 932 aaKnown RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CD83Q01151 205 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 IL1RL1Q01638 556 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 RUNX1T1Q06455 604 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 KIF5AQ12840 1032 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 GRSF1Q12849 480 aaKnown RBP eCLIP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 TRIM14Q14142 442 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 PPA1Q15181 289 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 SKOR2Q2VWA4 1001 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CCDC14Q49A88 953 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 SMUG1Q53HV7 270 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 PRR16Q569H4 304 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 SLC6A19Q695T7 634 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 ALKBH5Q6P6C2 394 aaKnown RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 TLDC1Q6P9B6 456 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 C11orf88Q6PI97 169 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 ATF7IPQ6VMQ6 1270 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 LEKR1Q6ZMV7 388 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 B4GALNT4Q76KP1 1039 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 ATG9AQ7Z3C6 839 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 KDELC2Q7Z4H8 507 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 GALNTL5Q7Z4T8 443 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CCDC84Q86UT8 332 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 LRRTM3Q86VH5 581 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 TPH2Q8IWU9 490 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CELF2-AS1Q8N7Q2 184 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 ANKRD53Q8N9V6 530 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 ZBTB8BQ8NAP8 495 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 OR6C4Q8NGE1 309 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 BAHD1Q8TBE0 780 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 MDM1Q8TC05 714 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 MIPOL1Q8TD10 442 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 RUFY2Q8WXA3 655 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 SHC3Q92529 594 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 TBC1D5Q92609 795 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CDCA5Q96FF9 252 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 THOC1Q96FV9 657 aaKnown RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 HSPA12BQ96MM6 686 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 SAMD11Q96NU1 681 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 MYD88Q99836 296 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 TREX2Q9BQ50 279 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 EDEM3Q9BZQ6 932 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 NT5C3AQ9H0P0 336 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CCDC8Q9H0W5 538 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 STMN4Q9H169 189 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 C2orf40Q9H1Z8 148 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CLSTN2Q9H4D0 955 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 SMARCAD1Q9H4L7 1026 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 AGO4Q9HCK5 861 aaKnown RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 LUC7LQ9NQ29 371 aaKnown RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 MAN1C1Q9NR34 630 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 PLSCR4Q9NRQ2 329 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 INTS10Q9NVR2 710 aaKnown RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 AATFQ9NY61 560 aaKnown RBP eCLIP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 SLC5A4Q9NY91 659 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 EXTL2Q9UBQ6 330 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CHORDC1Q9UHD1 332 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 RSPH14Q9UHP6 348 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 C19orf53Q9UNZ5 99 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-203ENST00000414174 PRELID1Q9Y255 219 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 WDR37Q9Y2I8 494 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 CRYL1Q9Y2S2 319 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 ST14Q9Y5Y6 855 aa3.98□□□□□ -1.77
SF3B1-203ENST00000414174 hCG_1642624A0A1W2PR95 340 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CCDC169A6NNP5 214 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms