RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 HAS3O00219 553 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 PDGFBP01127 241 aaPredicted RBP18.67■□□□□ 0.58
PTPRC-206ENST00000413409 HNRNPH3P31942 346 aaKnown RBP18.67■□□□□ 0.58
PTPRC-206ENST00000413409 CTNNB1P35222 781 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 CASP5P51878 434 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 JAK3P52333 1124 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 KRT76Q01546 638 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 CAMK1Q14012 370 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 PIGOQ8TEQ8 1089 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 GPRASP2Q96D09 838 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 EEF2KMTQ96G04 330 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 PCMTD1Q96MG8 357 aaPredicted RBP18.67■□□□□ 0.58
PTPRC-206ENST00000413409 CLEC1BQ9P126 229 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 DNAI1Q9UI46 699 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 DMXL1Q9Y485 3027 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 RSPH10B2B2RC85 870 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 CSPG5O95196 566 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 GH1P01241 217 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 RSPH10BP0C881 870 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 MYBP10242 640 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 SFNP31947 248 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 BMPR1AP36894 532 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 ID4P47928 161 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 ARHGEF16Q5VV41 709 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 ZNF662Q6ZS27 426 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 FRMD5Q7Z6J6 570 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 CCDC170Q8IYT3 715 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 TIPINQ9BVW5 301 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 LMAN2LQ9H0V9 348 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 WRAP73Q9P2S5 460 aaPredicted RBP18.66■□□□□ 0.58
PTPRC-206ENST00000413409 TCEAL9Q9UHQ7 104 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 EMSYQ7Z589 1322 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 DNAH14Q0VDD8 3507 aa18.66■□□□□ 0.58
PTPRC-206ENST00000413409 MAFGO15525 162 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 STAM2O75886 525 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 NDUFA10O95299 355 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 SLU7O95391 586 aaKnown RBP18.65■□□□□ 0.58
PTPRC-206ENST00000413409 NR2F2P24468 414 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 RPL13P26373 211 aaKnown RBP18.65■□□□□ 0.58
PTPRC-206ENST00000413409 HOXD13P35453 343 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 CYLC1P35663 651 aaPredicted RBP18.65■□□□□ 0.58
PTPRC-206ENST00000413409 MFSD10Q14728 455 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 KIAA0753Q2KHM9 967 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 RALGAPA2Q2PPJ7 1873 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 WDR59Q6PJI9 974 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 NLRX1Q86UT6 975 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 DNERQ8NFT8 737 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 MYO1AQ9UBC5 1043 aa18.65■□□□□ 0.58
PTPRC-206ENST00000413409 ZMYM2Q9UBW7 1377 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 WDR64B1ANS9 1081 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 GCNT3O95395 438 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 F2P00734 622 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 RB1P06400 928 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 ZNF286BP0CG31 522 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 MAPTP10636 758 aaKnown RBP18.64■□□□□ 0.57
PTPRC-206ENST00000413409 THPOP40225 353 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 NBL1P41271 181 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 QARSP47897 775 aaKnown RBP18.64■□□□□ 0.57
PTPRC-206ENST00000413409 KLK7P49862 253 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 GNG11P61952 73 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 ADAM9Q13443 819 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 ALCAMQ13740 583 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 DGKDQ16760 1214 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 SEPT14Q6ZU15 432 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 MTERF4Q7Z6M4 381 aaKnown RBP18.64■□□□□ 0.57
PTPRC-206ENST00000413409 VSIG10LQ86VR7 867 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 SMRP1Q8NCR6 262 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 NSUN6Q8TEA1 469 aaKnown RBP18.64■□□□□ 0.57
PTPRC-206ENST00000413409 INPP4AQ96PE3 977 aaPredicted RBP18.64■□□□□ 0.57
PTPRC-206ENST00000413409 SENP7Q9BQF6 1050 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 IFIH1Q9BYX4 1025 aaKnown RBP18.64■□□□□ 0.57
PTPRC-206ENST00000413409 METTL14Q9HCE5 456 aaKnown RBP18.64■□□□□ 0.57
PTPRC-206ENST00000413409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.64■□□□□ 0.57
PTPRC-206ENST00000413409 EPN1Q9Y6I3 576 aaPredicted RBP18.64■□□□□ 0.57
PTPRC-206ENST00000413409 NCOR2Q9Y618 2525 aa18.64■□□□□ 0.57
PTPRC-206ENST00000413409 DDX39AO00148 427 aaKnown RBP18.63■□□□□ 0.57
PTPRC-206ENST00000413409 GALR2O43603 387 aaPredicted RBP18.63■□□□□ 0.57
PTPRC-206ENST00000413409 KIF5CO60282 957 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 KRT37O76014 449 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 PRPF6O94906 941 aaKnown RBP18.63■□□□□ 0.57
PTPRC-206ENST00000413409 CASQ1P31415 396 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 NDUFV1P49821 464 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 ZNF746Q6NUN9 644 aaPredicted RBP18.63■□□□□ 0.57
PTPRC-206ENST00000413409 ADGRD2Q7Z7M1 963 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 SERINC5Q86VE9 423 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 C4orf19Q8IY42 314 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 FIBCD1Q8N539 461 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 MYCT1Q8N699 235 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 ACRBPQ8NEB7 543 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 NEK11Q8NG66 645 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 GOLGA5Q8TBA6 731 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 ZFP91Q96JP5 570 aaPredicted RBP18.63■□□□□ 0.57
PTPRC-206ENST00000413409 CDHR1Q96JP9 859 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 FIZ1Q96SL8 496 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 C11orf84Q9BUA3 381 aaPredicted RBP18.63■□□□□ 0.57
PTPRC-206ENST00000413409 NUCKS1Q9H1E3 243 aaKnown RBP18.63■□□□□ 0.57
PTPRC-206ENST00000413409 AGPAT5Q9NUQ2 364 aa18.63■□□□□ 0.57
PTPRC-206ENST00000413409 KMT2BQ9UMN6 2715 aaPredicted RBP18.63■□□□□ 0.57
PTPRC-206ENST00000413409 NFASCO94856 1347 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 EIF3CLB5ME19 914 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms