RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 BMP3P12645 472 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 BRAFP15056 766 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 IVDP26440 423 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 MSH2P43246 934 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 MCCD1P59942 119 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-202ENST00000413219 LACTBP83111 547 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-202ENST00000413219 RASA3Q14644 834 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 BANK1Q8NDB2 785 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 CNKSR1Q969H4 720 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 ZNF653Q96CK0 615 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 ANKRD27Q96NW4 1050 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 KCNK9Q9NPC2 374 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 KLHL14Q9P2G3 628 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 ASIC3Q9UHC3 531 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 RBBP6Q7Z6E9 1792 aaKnown RBP18.86■□□□□ 0.61
SDCBP-202ENST00000413219 FAM170AA1A519 330 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 ARHGEF35A5YM69 484 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 RIMBP2O15034 1052 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 SORBS3O60504 671 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 HIP1RO75146 1068 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 SLURP2P0DP57 97 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 CREB1P16220 341 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 CCNG1P51959 295 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 FMO1Q01740 532 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 C1orf220Q5T0J3 134 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 PPP1R21Q6ZMI0 780 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 DAW1Q8N136 415 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 FITM2Q8N6M3 262 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 SHC3Q92529 594 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 THOC1Q96FV9 657 aaKnown RBP18.85■□□□□ 0.61
SDCBP-202ENST00000413219 TGS1Q96RS0 853 aaKnown RBP18.85■□□□□ 0.61
SDCBP-202ENST00000413219 KCNQ5Q9NR82 932 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 CLDN3O15551 220 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 ATMINO43313 823 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-202ENST00000413219 DLATP10515 647 aaKnown RBP18.85■□□□□ 0.61
SDCBP-202ENST00000413219 STX2P32856 288 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 CHKAP35790 457 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 GCLMP48507 274 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 SNRPFP62306 86 aaKnown RBP18.85■□□□□ 0.61
SDCBP-202ENST00000413219 STRN3Q13033 797 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 MTFR1Q15390 333 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 SHROOM1Q2M3G4 852 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-202ENST00000413219 ANKRD42Q8N9B4 389 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 ACCSQ96QU6 501 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 WRAP73Q9P2S5 460 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-202ENST00000413219 GGT7Q9UJ14 662 aa18.85■□□□□ 0.61
SDCBP-202ENST00000413219 LY75O60449 1722 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 K7ENM7 598 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 GAS8O95995 478 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 MXI1P50539 228 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 MFAP3P55082 362 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 ATP11AP98196 1134 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 B3GNT9Q6UX72 402 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 FAM196AQ6ZSG2 479 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 XXYLT1Q8NBI6 393 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 RAB3IPQ96QF0 476 aaPredicted RBP18.84■□□□□ 0.61
SDCBP-202ENST00000413219 POP1Q99575 1024 aaKnown RBP18.84■□□□□ 0.61
SDCBP-202ENST00000413219 TRAIPQ9BWF2 469 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 EHMT1Q9H9B1 1298 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 NKIRAS1Q9NYS0 192 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 LARSQ9P2J5 1176 aaKnown RBP18.84■□□□□ 0.61
SDCBP-202ENST00000413219 CHORDC1Q9UHD1 332 aaPredicted RBP18.84■□□□□ 0.61
SDCBP-202ENST00000413219 LOXHD1Q8IVV2 1947 aa18.84■□□□□ 0.61
SDCBP-202ENST00000413219 ADAMTSL1Q8N6G6 1762 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 KLRG2A4D1S0 409 aaPredicted RBP18.83■□□□□ 0.61
SDCBP-202ENST00000413219 LIN7AO14910 233 aaPredicted RBP18.83■□□□□ 0.61
SDCBP-202ENST00000413219 CDH16O75309 829 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 CDR2Q01850 454 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 MPP2Q14168 576 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 CPNE8Q86YQ8 564 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 RELL1Q8IUW5 271 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 C1orf54Q8WWF1 131 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 BTBD6Q96KE9 485 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 KREMEN1Q96MU8 473 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 ZDHHC15Q96MV8 337 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 ZC3H12CQ9C0D7 883 aaKnown RBP18.83■□□□□ 0.61
SDCBP-202ENST00000413219 UNC45AQ9H3U1 944 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 NINJ2Q9NZG7 142 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 PNMA3Q9UL41 463 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 SYNPO2Q9UMS6 1093 aa18.83■□□□□ 0.61
SDCBP-202ENST00000413219 FAM196BA6NMK8 535 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 PPEF1O14829 653 aaPredicted RBP18.83■□□□□ 0.6
SDCBP-202ENST00000413219 CYP26A1O43174 497 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 THAP12O43422 761 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.6
SDCBP-202ENST00000413219 ATP5HO75947 161 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 CRKP46108 304 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 ITGA8P53708 1063 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 STAT4Q14765 748 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 CGB2Q6NT52 195 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 BZW1Q7L1Q6 419 aaKnown RBP18.83■□□□□ 0.6
SDCBP-202ENST00000413219 RIBC1Q8N443 379 aaPredicted RBP18.83■□□□□ 0.6
SDCBP-202ENST00000413219 BBOF1Q8ND07 529 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 FBF1Q8TES7 1133 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 KAT5Q92993 513 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 ZNF570Q96NI8 536 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 CCDC77Q9BR77 488 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 IDI2Q9BXS1 227 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 TMEM117Q9H0C3 514 aa18.83■□□□□ 0.6
SDCBP-202ENST00000413219 TXLNGQ9NUQ3 528 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms