RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 DNAJB4Q9UDY4 337 aa14.43□□□□□ -0.1
HDAC8-210ENST00000412342 ANK1P16157 1881 aa14.43□□□□□ -0.1
HDAC8-210ENST00000412342 TISP43B9A030 160 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 ANKRD63C9JTQ0 380 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 HNRNPDLO14979 420 aaKnown RBP14.42□□□□□ -0.1
HDAC8-210ENST00000412342 BCAR1P56945 870 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 PLCB3Q01970 1234 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 SNW1Q13573 536 aaKnown RBP14.42□□□□□ -0.1
HDAC8-210ENST00000412342 NOLC1Q14978 699 aaKnown RBP eCLIP14.42□□□□□ -0.1
HDAC8-210ENST00000412342 CSPP1Q1MSJ5 1256 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 XKR4Q5GH76 650 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 L1TD1Q5T7N2 865 aaKnown RBP14.42□□□□□ -0.1
HDAC8-210ENST00000412342 KRBA2Q6ZNG9 492 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 EPM2AIP1Q7L775 607 aaPredicted RBP14.42□□□□□ -0.1
HDAC8-210ENST00000412342 ZBTB33Q86T24 672 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 COLGALT2Q8IYK4 626 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 CEP57L1Q8IYX8 460 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 FMR1NBQ8N0W7 255 aaPredicted RBP14.42□□□□□ -0.1
HDAC8-210ENST00000412342 BCL7CQ8WUZ0 217 aaPredicted RBP14.42□□□□□ -0.1
HDAC8-210ENST00000412342 ZNF558Q96NG5 402 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 LMAN2LQ9H0V9 348 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 ALG13Q9NP73 1137 aaKnown RBP14.42□□□□□ -0.1
HDAC8-210ENST00000412342 AAASQ9NRG9 546 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 KANSL3Q9P2N6 904 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 ANKFY1Q9P2R3 1169 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 PARP2Q9UGN5 583 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 STYXL1Q9Y6J8 313 aa14.42□□□□□ -0.1
HDAC8-210ENST00000412342 A0A0B4J269 797 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 PVALEFA0A1B0GWK0 134 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 GTPBP6O43824 516 aaPredicted RBP14.41□□□□□ -0.1
HDAC8-210ENST00000412342 ZC3H11AO75152 810 aaKnown RBP eCLIP14.41□□□□□ -0.1
HDAC8-210ENST00000412342 FGF18O76093 207 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 ZNF202O95125 648 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 GCNT3O95395 438 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 GALTP07902 379 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 IGFBP4P22692 258 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 HOXD13P35453 343 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 SLC11A1P49279 550 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 LIG4P49917 911 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 GRIK3Q13003 919 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 ALCAMQ13740 583 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 TPRNQ4KMQ1 711 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 FAM26FQ5R3K3 315 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 SPOUT1Q5T280 376 aaKnown RBP14.41□□□□□ -0.1
HDAC8-210ENST00000412342 ALKAL1Q6UXT8 129 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 APBB1IPQ7Z5R6 666 aaPredicted RBP14.41□□□□□ -0.1
HDAC8-210ENST00000412342 MRPL38Q96DV4 380 aaKnown RBP14.41□□□□□ -0.1
HDAC8-210ENST00000412342 IPO9Q96P70 1041 aaKnown RBP14.41□□□□□ -0.1
HDAC8-210ENST00000412342 TMEM175Q9BSA9 504 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 MARCH5Q9NX47 278 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 GDAQ9Y2T3 454 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 PCDHB12Q9Y5F1 795 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 MYO7AQ13402 2215 aa14.41□□□□□ -0.1
HDAC8-210ENST00000412342 SPTBN5Q9NRC6 3674 aaKnown RBP14.4□□□□□ -0.1
HDAC8-210ENST00000412342 NT5C1B-RDH14C9J2C7 533 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 CLDN3O15551 220 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 GADD45BO75293 160 aaPredicted RBP14.4□□□□□ -0.1
HDAC8-210ENST00000412342 PRPF6O94906 941 aaKnown RBP14.4□□□□□ -0.1
HDAC8-210ENST00000412342 EFEMP2O95967 443 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 MYL1P05976 194 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 HARSP12081 509 aaKnown RBP14.4□□□□□ -0.1
HDAC8-210ENST00000412342 ADSSP30520 456 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 PPM1AP35813 382 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 OSTNP61366 133 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 SEZ6Q53EL9 994 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 ZBTB41Q5SVQ8 909 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 THNSL1Q8IYQ7 743 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 MAFAQ8NHW3 353 aaPredicted RBP14.4□□□□□ -0.1
HDAC8-210ENST00000412342 POF1BQ8WVV4 589 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 BICD1Q96G01 975 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 SNX27Q96L92 541 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 PPP1R10Q96QC0 940 aaKnown RBP14.4□□□□□ -0.1
HDAC8-210ENST00000412342 TCHPQ9BT92 498 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 VN1R3Q9BXE9 311 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
HDAC8-210ENST00000412342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.39□□□□□ -0.11
HDAC8-210ENST00000412342 FSCN2O14926 492 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 EIF3DO15371 548 aaKnown RBP eCLIP14.39□□□□□ -0.11
HDAC8-210ENST00000412342 IRS1P35568 1242 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 TNFSF9P41273 254 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 UBE3AQ05086 875 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 RNASELQ05823 741 aaKnown RBP14.39□□□□□ -0.11
HDAC8-210ENST00000412342 FAM160A1Q05DH4 1040 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 DPYDQ12882 1025 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 BMT2Q1RMZ1 405 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 SLC10A6Q3KNW5 377 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 CLEC17AQ6ZS10 378 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 ZNF507Q8TCN5 953 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 SCFD1Q8WVM8 642 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 IGSF21Q96ID5 467 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
HDAC8-210ENST00000412342 ACCSQ96QU6 501 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 RPS6KC1Q96S38 1066 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 CCDC94Q9BW85 323 aaPredicted RBP14.39□□□□□ -0.11
HDAC8-210ENST00000412342 GBP3Q9H0R5 595 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 SPG21Q9NZD8 308 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 CNTN3Q9P232 1028 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 LZTS1Q9Y250 596 aa14.39□□□□□ -0.11
HDAC8-210ENST00000412342 F8W810 466 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms