RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 FXR1P51114 621 aaKnown RBP eCLIP5.39□□□□□ -1.55
BRCA1-204ENST00000412061 GPSM2P81274 684 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 MGAT5Q09328 741 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 TBX2Q13207 712 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-204ENST00000412061 EIF4HQ15056 248 aaKnown RBP5.39□□□□□ -1.55
BRCA1-204ENST00000412061 TOMM20Q15388 145 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 DACT2Q5SW24 774 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 CNKSR3Q6P9H4 555 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 FAM180AQ6UWF9 173 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 SYDE1Q6ZW31 735 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-204ENST00000412061 FAM129CQ86XR2 697 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 BCL6BQ8N143 479 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-204ENST00000412061 POU5F2Q8N7G0 328 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 GLB1L3Q8NCI6 653 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-204ENST00000412061 PPP1R14CQ8TAE6 165 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 RIPOR3Q96MK2 946 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 WDR92Q96MX6 357 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 FDXACB1Q9BRP7 624 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-204ENST00000412061 SOX7Q9BT81 388 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 VPS11Q9H270 941 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 GREM2Q9H772 168 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 L2HGDHQ9H9P8 463 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 SPATA6Q9NWH7 488 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-204ENST00000412061 POLG2Q9UHN1 485 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 DNAI1Q9UI46 699 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 SERPINB13Q9UIV8 391 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 CDC42EP3Q9UKI2 254 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 HDAC9Q9UKV0 1011 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 RASA4BC9J798 803 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 FAM227AF5H4B4 570 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 hCG_1984214I3L0E3 225 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 RASA4O43374 803 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 SNX2O60749 519 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 KLHL18O94889 574 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 MED14OSP0DP75 135 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 HSD3B1P14060 373 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 PDCP20941 246 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 WASP42768 502 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 MCAMP43121 646 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 ETV4P43268 484 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 KCNQ1P51787 676 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 SESN2P58004 480 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-204ENST00000412061 MEF2AQ02078 507 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-204ENST00000412061 TOP3AQ13472 1001 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-204ENST00000412061 GJC2Q5T442 439 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-204ENST00000412061 RNF220Q5VTB9 566 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 KLHDC10Q6PID8 442 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 SAPCD2Q86UD0 394 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 MYCT1Q8N699 235 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 NRG4Q8WWG1 115 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 ERP27Q96DN0 273 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 C1GALT1C1Q96EU7 318 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 CDK5RAP3Q96JB5 506 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 FAM84AQ96KN4 292 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 PWWP2AQ96N64 755 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 MYLK2Q9H1R3 596 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 TMEM60Q9H2L4 133 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 CLIC5Q9NZA1 410 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 NTMQ9P121 344 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 SCOCQ9UIL1 159 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 VWA7Q9Y334 891 aa5.38□□□□□ -1.55
BRCA1-204ENST00000412061 TCAF2A6NFQ2 919 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 H3BML4 177 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 J3KRW8 73 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 DAPK3O43293 454 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 HMGCRP04035 888 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 PI3P19957 117 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 ABCB4P21439 1286 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 PEX2P28328 305 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 IL6STP40189 918 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-204ENST00000412061 STAT5BP51692 787 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 CAP1Q01518 475 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 MESP2Q0VG99 397 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 SSPNQ14714 243 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 USP45Q70EL2 814 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 RSRC2Q7L4I2 434 aaKnown RBP5.37□□□□□ -1.55
BRCA1-204ENST00000412061 DENND1CQ8IV53 801 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 KIAA0319LQ8IZA0 1049 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 RTKN2Q8IZC4 609 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 OR2C3Q8N628 320 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 IL17REQ8NFR9 667 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 NKD2Q969F2 451 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-204ENST00000412061 GFM2Q969S9 779 aaKnown RBP5.37□□□□□ -1.55
BRCA1-204ENST00000412061 MVB12AQ96EY5 273 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 PPP1R16BQ96T49 567 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 ISCA1Q9BUE6 129 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 RBM12Q9NTZ6 932 aaKnown RBP5.37□□□□□ -1.55
BRCA1-204ENST00000412061 RRN3Q9NYV6 651 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 CDC23Q9UJX2 597 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 CNOT6Q9ULM6 557 aaKnown RBP5.37□□□□□ -1.55
BRCA1-204ENST00000412061 GPR52Q9Y2T5 361 aa5.37□□□□□ -1.55
BRCA1-204ENST00000412061 CCDC154A6NI56 674 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 FAM171A2A8MVW0 826 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 RFXAPO00287 272 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 GOLIM4O00461 696 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 DDX3XO00571 662 aaKnown RBP eCLIP5.36□□□□□ -1.55
BRCA1-204ENST00000412061 FIBPO43427 364 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 HTRA2O43464 458 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-204ENST00000412061 FARP2O94887 1054 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-204ENST00000412061 UBXN7O94888 489 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms