RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 PCBP1Q15365 356 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 PFKFB3Q16875 520 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 PPM1LQ5SGD2 360 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 FUT10Q6P4F1 479 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 TSSK4Q6SA08 328 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 TPRG1Q6ZUI0 275 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 MIER3Q7Z3K6 550 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 SRGAP1Q7Z6B7 1085 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 GRASPQ7Z6J2 395 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 KSR1Q8IVT5 923 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 CELF5Q8N6W0 485 aaKnown RBP6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 SLC7A3Q8WY07 619 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 SLC5A5Q92911 643 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 FGF13Q92913 245 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 CCDC136Q96JN2 1154 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 MBOAT7Q96N66 472 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 CEP89Q96ST8 783 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 KXD1Q9BQD3 176 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 LRRC2Q9BYS8 371 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 PARD6AQ9NPB6 346 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 FAM217BQ9NTX9 383 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 ADAM28Q9UKQ2 775 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 COL4A3BPQ9Y5P4 624 aa6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.71□□□□□ -1.34
HMGN1P20-201ENST00000411849 ZMYM2Q9UBW7 1377 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 TMEM150BA6NC51 233 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 GOLGA8AA7E2F4 631 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 DDX11L8A8MPP1 907 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 GOLGA8BA8MQT2 603 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 SLC27A2O14975 620 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 DKC1O60832 514 aaKnown RBP eCLIP6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 SRGAP2CP0DJJ0 459 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 RPL17P18621 184 aaKnown RBP6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 AXLP30530 894 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 HOXA11P31270 313 aaPredicted RBP6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 MLH1P40692 756 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 RCAN1P53805 252 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 PSMC5P62195 406 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 MTAPQ13126 283 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 CSRP2Q16527 193 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 UBXN11Q5T124 520 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 RNF20Q5VTR2 975 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 NOTUMQ6P988 496 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 PDXDC1Q6P996 788 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 PRR23CQ6ZRP0 262 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 SMG8Q8ND04 991 aaKnown RBP6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 ST13P5Q8NFI4 369 aaPredicted RBP6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 CCDC148Q8NFR7 591 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 TCP11Q8WWU5 503 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 PRPF31Q8WWY3 499 aaKnown RBP6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 PSPC1Q8WXF1 523 aaKnown RBP6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 DNASE1L2Q92874 299 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 CCDC51Q96ER9 411 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 B3GALT6Q96L58 329 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 GAD1Q99259 594 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 SH2D3AQ9BRG2 576 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 TRIM6Q9C030 488 aaPredicted RBP6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 UNC45AQ9H3U1 944 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 FBXW11Q9UKB1 542 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 KCNH3Q9ULD8 1083 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 POLIQ9UNA4 740 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 PPME1Q9Y570 386 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 IPPQ9Y573 584 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 FRYLO94915 3013 aa6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 SF3B1O75533 1304 aaKnown RBP eCLIP6.7□□□□□ -1.34
HMGN1P20-201ENST00000411849 EML5Q05BV3 1969 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 CNOT1A5YKK6 2376 aaKnown RBP6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 NUP210Q8TEM1 1887 aaPredicted RBP6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 F8W810 466 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 MAN2B1O00754 1011 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 ARHGAP33O14559 1287 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 ASAP2O43150 1006 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 TADA2AO75478 443 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 ECI2O75521 394 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 PSMD10O75832 226 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 STBD1O95210 358 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 C8AP07357 584 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 POU2F2P09086 479 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 TARSP26639 723 aaKnown RBP6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 CNR2P34972 360 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 RFC5P40937 340 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 SCNN1GP51170 649 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 CCR3P51677 355 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 NTHL1P78549 312 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 SHC2P98077 582 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 LAMTOR4Q0VGL1 99 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 GRIK3Q13003 919 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 COL9A3Q14050 684 aaPredicted RBP6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 NECTIN1Q15223 517 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 PSMD5Q16401 504 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 LPAL2Q16609 132 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 UVSSAQ2YD98 709 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 PABPC1LQ4VXU2 614 aaKnown RBP6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 CREB3L3Q68CJ9 461 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 IL31Q6EBC2 164 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 PRSS55Q6UWB4 352 aaPredicted RBP6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 PRR23BQ6ZRT6 265 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 ANO5Q75V66 913 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 RTL10Q7L3V2 364 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms