RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 FAM210AQ96ND0 272 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 PFDN5Q99471 154 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 MANSC1Q9H8J5 431 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 C12orf4Q9NQ89 552 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 ZBTB40Q9NUA8 1239 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 RPS6KB2Q9UBS0 482 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 MAGED2Q9UNF1 606 aaPredicted RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 TOP2AP11388 1531 aaKnown RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 MINDY4BA8MYZ0 360 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 E7ENQ6 273 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 PPIP5K2O43314 1243 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 PPP1R37O75864 691 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 GATBO75879 557 aaKnown RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 ERCC2P18074 760 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 CHN2P52757 468 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 IFRD2Q12894 506 aaPredicted RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 PSMD5Q16401 504 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 DHX32Q7L7V1 743 aaKnown RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF467Q7Z7K2 595 aaPredicted RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 LEMD2Q8NC56 503 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 ATL2Q8NHH9 583 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 GOLGA2P5Q9HBQ8 144 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 CASS4Q9NQ75 786 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 INTS9Q9NV88 658 aaKnown RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 NDUFA13Q9P0J0 144 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 FARSAQ9Y285 508 aaKnown RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 hCG_2014768A0A024R1R8 64 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 CTNND1O60716 968 aaKnown RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 IDH1O75874 414 aaKnown RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 PER3P56645 1201 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 YWHAGP61981 247 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 VMACQ2NL98 169 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 NAALADL2Q58DX5 795 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 PM20D2Q8IYS1 436 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 CAPSLQ8WWF8 208 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 DLG3Q92796 817 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 PUS7LQ9H0K6 701 aaKnown RBP4.83□□□□□ -1.64
PTPN13-202ENST00000411767 HESX1Q9UBX0 185 aa4.83□□□□□ -1.64
PTPN13-202ENST00000411767 TRIM64BA6NI03 449 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 H3BM21 787 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 CCDC22O60826 627 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 HSD17B3P37058 310 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 MECP2P51608 486 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PPP2CAP67775 309 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 HSF2Q03933 536 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TOMM20Q15388 145 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 HIST2H2ACQ16777 129 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 OTUD7BQ6GQQ9 843 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 FIGNL1Q6PIW4 674 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 SUGP1Q8IWZ8 645 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 MYOCDQ8IZQ8 938 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 DQX1Q8TE96 717 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 NSMCE2Q96MF7 247 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 H2AFJQ9BTM1 129 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TRIM62Q9BVG3 475 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 GPN1Q9HCN4 374 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 CYP39A1Q9NYL5 469 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 USTQ9Y2C2 406 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 RTL9Q8NET4 1388 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 GRXCR2A6NFK2 248 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 E7ESA3 106 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PSIP1O75475 530 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 RBMXL2O75526 392 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 CYP17A1P05093 508 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 YARSP54577 528 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 GARNL3Q5VVW2 1013 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 HMBOX1Q6NT76 420 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 MZT2AQ6P582 158 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 RFX8Q6ZV50 586 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 KIAA0825Q8IV33 1275 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TCTEX1D2Q8WW35 142 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 GDPD2Q9HCC8 539 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 IL1RAPL1Q9NZN1 696 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 CA5BQ9Y2D0 317 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 ADGRA3Q8IWK6 1321 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PSTPIP1O43586 416 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PMPCBO75439 489 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 MTHFD1P11586 935 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 CEBPGP53567 150 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 SRSF11Q05519 484 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 NFE2L1Q14494 772 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PTPRNQ16849 979 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 OLFML1Q6UWY5 402 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 IZUMO2Q6UXV1 221 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PLA2G4DQ86XP0 818 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 C12orf56Q8IXR9 622 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 ASAP3Q8TDY4 903 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 ERLEC1Q96DZ1 483 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 BTBD9Q96Q07 612 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PPP1R16BQ96T49 567 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 STK33Q9BYT3 514 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 GINM1Q9NU53 330 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 GNG13Q9P2W3 67 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 GHRLQ9UBU3 117 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 DNM3Q9UQ16 869 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 MTO1Q9Y2Z2 717 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 ASB14A6NK59 587 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 HIST1H2AGP0C0S8 130 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 HIST1H2ADP20671 130 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 OAS2P29728 719 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms