RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 H0Y8X5 98 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 KRT36O76013 467 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 SPATA31D3P0C874 917 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 P0C879 139 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZNF26P17031 533 aaPredicted RBP-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 RNASE9P60153 205 aaKnown RBP-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 ATP2C1P98194 919 aaPredicted RBP-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 POU3F1Q03052 451 aaPredicted RBP-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 SRSF1Q07955 248 aaKnown RBP eCLIP-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 PDE4DQ08499 809 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 TMEM201Q5SNT2 666 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 SPATA31D4Q6ZUB0 917 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 RTL10Q7L3V2 364 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 DTX2Q86UW9 622 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 CPNE8Q86YQ8 564 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 ANKMY2Q8IV38 441 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZNF584Q8IVC4 421 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 TEX2Q8IWB9 1127 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 SSH3Q8TE77 659 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZNF845Q96IR2 970 aaPredicted RBP-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 SCRT1Q9BWW7 348 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 IL23AQ9NPF7 189 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 OGFRQ9NZT2 677 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 TINAGQ9UJW2 476 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 CDC42EP3Q9UKI2 254 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 IKZF3Q9UKT9 509 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 COL6A5A8TX70 2615 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 LRP1BQ9NZR2 4599 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 HECTD1Q9ULT8 2610 aa-0.85□□□□□ -2.54
RNU4-88P-201ENST00000411220 VWFP04275 2813 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 KIR2DS1A0A191URI9 304 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 C7orf72A4D263 438 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 HMX3A6NHT5 357 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 ZNF839A8K0R7 811 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 TARM1B6A8C7 271 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 J3KR12 359 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 EPHB6O15197 1021 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 SREBF1P36956 1147 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 RBMXP38159 391 aaKnown RBP-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 ADCY8P40145 1251 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 NKX2-1P43699 371 aaPredicted RBP-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 RBM6P78332 1123 aaKnown RBP-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 ST5P78524 1137 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 KIR2DS1Q14954 304 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 FAM153CQ494X1 144 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 CFAP70Q5T0N1 1121 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 PCNX4Q63HM2 1172 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 RCSD1Q6JBY9 416 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 CATSPERGQ6ZRH7 1159 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 PIP4P1Q86T03 277 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 MARCH9Q86YJ5 346 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 LINC00612Q8N6U2 182 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 LPPQ93052 612 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 ARL8AQ96BM9 186 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 FOXRED1Q96CU9 486 aaPredicted RBP-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 RADILQ96JH8 1075 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 PPP1R13BQ96KQ4 1090 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 TSG101Q99816 390 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 SMR3AQ99954 134 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 CEP44Q9C0F1 390 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 SLC6A15Q9H2J7 730 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 PPP4R2Q9NY27 417 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 MARCOQ9UEW3 520 aaPredicted RBP-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 PRSS21Q9Y6M0 314 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 CUL9Q8IWT3 2517 aa-0.85□□□□□ -2.55
RNU4-88P-201ENST00000411220 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 PRRT4C9JH25 899 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 RGS13O14921 159 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 MYO1BO43795 1136 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 RPS2P15880 293 aaKnown RBP-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 ZNF32P17041 273 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 GRIA3P42263 894 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 ME1P48163 572 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 ADPRHP54922 357 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 PHC1P78364 1004 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 DSC2Q02487 901 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 PEX6Q13608 980 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 ACAP1Q15027 740 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 ZRSR1Q15695 479 aaKnown RBP-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 DGKDQ16760 1214 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 NOM1Q5C9Z4 860 aaKnown RBP-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 MIS18BP1Q6P0N0 1132 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 SPSB3Q6PJ21 355 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 CAPN12Q6ZSI9 719 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 PEG10Q86TG7 708 aaKnown RBP-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 RSPH3Q86UC2 560 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 ZNF548Q8NEK5 533 aaPredicted RBP-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 MIB2Q96AX9 1013 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 CFAP44Q96MT7 982 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 ZNF599Q96NL3 588 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 MMS19Q96T76 1030 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 KCTD5Q9NXV2 234 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 RCAN3Q9UKA8 241 aa-0.86□□□□□ -2.55
RNU4-88P-201ENST00000411220 CACNA1EQ15878 2313 aa-0.87□□□□□ -2.55
RNU4-88P-201ENST00000411220 FAT2Q9NYQ8 4349 aa-0.87□□□□□ -2.55
RNU4-88P-201ENST00000411220 OTOGQ6ZRI0 2925 aa-0.87□□□□□ -2.55
RNU4-88P-201ENST00000411220 CELSR1Q9NYQ6 3014 aa-0.87□□□□□ -2.55
RNU4-88P-201ENST00000411220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP-0.87□□□□□ -2.55
RNU4-88P-201ENST00000411220 GOLGA8BA8MQT2 603 aa-0.87□□□□□ -2.55
RNU4-88P-201ENST00000411220 CHURC1-FNTBB4DL54 471 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms