RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 PCDHGA5Q9Y5G8 931 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 COL4A3BPQ9Y5P4 624 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 PIAS3Q9Y6X2 628 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 V9GY48 417 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SF3B1O75533 1304 aaKnown RBP eCLIP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 PCNX2A6NKB5 2137 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SETXQ7Z333 2677 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 MYH6P13533 1939 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 UNC79Q9P2D8 2635 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF462Q96JM2 2506 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 KIAA1671Q9BY89 1806 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC163A0A0D9SF12 145 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ESYT2A0FGR8 921 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 SHISA7A6NL88 538 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 DDX11L8A8MPP1 907 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 F8W810 466 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 INO80B-WBP1J3KQ70 363 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 K7ESF4 209 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 TAF4O00268 1085 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF197O14709 1029 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF263O14978 683 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 MSH4O15457 936 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ASAP2O43150 1006 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CHMP2AO43633 222 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 DKC1O60832 514 aaKnown RBP eCLIP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RPP40O75818 363 aaKnown RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 MICAL2O94851 1124 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 EPN2O95208 641 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 LRG1P02750 347 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RHOP08100 348 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 SRGAP2CP0DJJ0 459 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CHRNB1P11230 501 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PTPN2P17706 415 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PSMC3P17980 439 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCNE1P24864 410 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 GNA11P29992 359 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 AXLP30530 894 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 GDI1P31150 447 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ELF1P32519 619 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 OR1D2P34982 312 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 MPLP40238 635 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RFC5P40937 340 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RBM25P49756 843 aaKnown RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 SCNN1GP51170 649 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PTENP60484 403 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PSMC5P62195 406 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PTH1RQ03431 593 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 SPIRE1Q08AE8 756 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF252P-AS1Q0IIN9 211 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 FOXC1Q12948 553 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 GRIK3Q13003 919 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PTGDRQ13258 359 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 TUSC3Q13454 348 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RAB33AQ14088 237 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 GAS6Q14393 721 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 GRM2Q14416 872 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 HSP90AA2PQ14568 343 aaPredicted RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PSMD5Q16401 504 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 UGCGQ16739 394 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RTN1Q16799 776 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 FAM78AQ5JUQ0 283 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 DGKKQ5KSL6 1271 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RTP2Q5QGT7 225 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CYP4A22Q5TCH4 519 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 FAM171A1Q5VUB5 890 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 LRCH2Q5VUJ6 765 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 DAB2IPQ5VWQ8 1189 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 IQCEQ6IPM2 695 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 B4GALNT3Q6L9W6 998 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PSAPL1Q6NUJ1 521 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 NOTUMQ6P988 496 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRSS55Q6UWB4 352 aaPredicted RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 MIER3Q7Z3K6 550 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CACNA2D4Q7Z3S7 1137 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 WDR5BQ86VZ2 330 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 SGMS1Q86VZ5 419 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CHD1LQ86WJ1 897 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 MICU3Q86XE3 530 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CEP57Q86XR8 500 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RAB11FIP4Q86YS3 637 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 MAP4K3Q8IVH8 894 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 KSR1Q8IVT5 923 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 SMC5Q8IY18 1101 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF687Q8N1G0 1237 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 REXO1Q8N1G1 1221 aaKnown RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 SYNPOQ8N3V7 929 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RNF149Q8NC42 400 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 SMG8Q8ND04 991 aaKnown RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 EXOC6Q8TAG9 804 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 LNX1Q8TBB1 728 aaPredicted RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 BICD2Q8TD16 824 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CSGALNACT1Q8TDX6 532 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC12Q8WUD4 166 aaPredicted RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 GAB3Q8WWW8 586 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRPF31Q8WWY3 499 aaKnown RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PSPC1Q8WXF1 523 aaKnown RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZCCHC14Q8WYQ9 949 aaKnown RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 E2F7Q96AV8 911 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC51Q96ER9 411 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZFP42Q96MM3 310 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms