RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
MCF2L-210ENST00000409954 PDZD7Q9H5P4 517 aa16.01■□□□□ 0.15
MCF2L-210ENST00000409954 MAN1C1Q9NR34 630 aa16.01■□□□□ 0.15
MCF2L-210ENST00000409954 SNTG2Q9NY99 539 aa16.01■□□□□ 0.15
MCF2L-210ENST00000409954 PHLPP2Q6ZVD8 1323 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 ST18O60284 1047 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 PAPLNO95428 1278 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 BRD1O95696 1058 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 PRPHP41219 470 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 TOB1P50616 345 aaPredicted RBP16■□□□□ 0.15
MCF2L-210ENST00000409954 ELAVL2Q12926 359 aaKnown RBP16■□□□□ 0.15
MCF2L-210ENST00000409954 RABEP1Q15276 862 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 ECM1Q16610 540 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 DCAF4L1Q3SXM0 396 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 IER5LQ5T953 404 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 PDXDC1Q6P996 788 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 LILRA6Q6PI73 481 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 DTHD1Q6ZMT9 781 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 BSNDQ8WZ55 320 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 CCDC113Q9H0I3 377 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 C17orf75Q9HAS0 396 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 WDR6Q9NNW5 1121 aaKnown RBP16■□□□□ 0.15
MCF2L-210ENST00000409954 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
MCF2L-210ENST00000409954 IGSF9Q9P2J2 1179 aa16■□□□□ 0.15
MCF2L-210ENST00000409954 RBM19Q9Y4C8 960 aaKnown RBP16■□□□□ 0.15
MCF2L-210ENST00000409954 SF3B1O75533 1304 aaKnown RBP eCLIP15.99■□□□□ 0.15
MCF2L-210ENST00000409954 MRE11P49959 708 aa15.99■□□□□ 0.15
MCF2L-210ENST00000409954 C8orf34Q49A92 452 aa15.99■□□□□ 0.15
MCF2L-210ENST00000409954 RILPL1Q5EBL4 403 aa15.99■□□□□ 0.15
MCF2L-210ENST00000409954 PALB2Q86YC2 1186 aa15.99■□□□□ 0.15
MCF2L-210ENST00000409954 SNX29Q8TEQ0 813 aa15.99■□□□□ 0.15
MCF2L-210ENST00000409954 RIN2Q8WYP3 895 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-210ENST00000409954 NXPE3Q969Y0 559 aa15.99■□□□□ 0.15
MCF2L-210ENST00000409954 NT5C3AQ9H0P0 336 aa15.99■□□□□ 0.15
MCF2L-210ENST00000409954 TMEM134Q9H6X4 195 aa15.99■□□□□ 0.15
MCF2L-210ENST00000409954 ZDHHC7Q9NXF8 308 aa15.99■□□□□ 0.15
MCF2L-210ENST00000409954 PCDHB6Q9Y5E3 794 aa15.99■□□□□ 0.15
MCF2L-210ENST00000409954 TTLL13PA6NNM8 815 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 TGM5O43548 720 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 ASGR2P07307 311 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 LIG1P18858 919 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 TDGQ13569 410 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 ATF7IP2Q5U623 682 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 DCLRE1AQ6PJP8 1040 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 NTPCRQ9BSD7 190 aaKnown RBP15.98■□□□□ 0.15
MCF2L-210ENST00000409954 TTPALQ9BTX7 342 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 TIPINQ9BVW5 301 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 PIDD1Q9HB75 910 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.98■□□□□ 0.15
MCF2L-210ENST00000409954 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.98■□□□□ 0.151e-6■■■■■ 27.8
MCF2L-210ENST00000409954 TNFSF13BQ9Y275 285 aa15.98■□□□□ 0.15
MCF2L-210ENST00000409954 CCDC169A6NNP5 214 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 F8W810 466 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 PTGESO14684 152 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 RECQL4O94761 1208 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 MCM2P49736 904 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 NBR1Q14596 966 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 NT5DC1Q5TFE4 455 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 FAM171A1Q5VUB5 890 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 PRSS33Q8NF86 280 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 PIK3R5Q8WYR1 880 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 SMG7Q92540 1137 aaKnown RBP15.97■□□□□ 0.15
MCF2L-210ENST00000409954 DRC1Q96MC2 740 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 UROC1Q96N76 676 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 PRKD2Q9BZL6 878 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 UPF2Q9HAU5 1272 aaKnown RBP15.97■□□□□ 0.15
MCF2L-210ENST00000409954 KCNK12Q9HB15 430 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 POLD4Q9HCU8 107 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 PIEZO1Q92508 2521 aa15.97■□□□□ 0.15
MCF2L-210ENST00000409954 C5orf42Q9H799 3197 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 CASTOR2A6NHX0 329 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 E9PMD0 336 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 TRAPPC3O43617 180 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 SPATA31D3P0C874 917 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 NPTX2P47972 431 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 CLCN5P51795 746 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 YARSP54577 528 aaKnown RBP15.96■□□□□ 0.15
MCF2L-210ENST00000409954 PEX3P56589 373 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 NAB2Q15742 525 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 EEF1DP3Q658K8 133 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 MCTP1Q6DN14 999 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 RINT1Q6NUQ1 792 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 SPATA31D4Q6ZUB0 917 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 RTL10Q7L3V2 364 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 CEP57Q86XR8 500 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 LNX1Q8TBB1 728 aaPredicted RBP15.96■□□□□ 0.15
MCF2L-210ENST00000409954 RABGGTAQ92696 567 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 B3GALT6Q96L58 329 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 ACO2Q99798 780 aaKnown RBP15.96■□□□□ 0.15
MCF2L-210ENST00000409954 PAAF1Q9BRP4 392 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 TOPORSQ9NS56 1045 aaPredicted RBP15.96■□□□□ 0.15
MCF2L-210ENST00000409954 GDAQ9Y2T3 454 aa15.96■□□□□ 0.15
MCF2L-210ENST00000409954 TMEM189-UBE2V1I3L0A0 370 aa15.95■□□□□ 0.14
MCF2L-210ENST00000409954 RFPL2O75678 378 aa15.95■□□□□ 0.14
MCF2L-210ENST00000409954 ZMYND10O75800 440 aa15.95■□□□□ 0.14
MCF2L-210ENST00000409954 GBP2P32456 591 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-210ENST00000409954 SMTNP53814 917 aa15.95■□□□□ 0.14
MCF2L-210ENST00000409954 VCPP55072 806 aaKnown RBP15.95■□□□□ 0.14
MCF2L-210ENST00000409954 TCF15Q12870 199 aa15.95■□□□□ 0.14
MCF2L-210ENST00000409954 DMP1Q13316 513 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms