RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.7□□□□□ -0.221e-16■■■■■ 250
PMS1-204ENST00000409823 SNTG2Q9NY99 539 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 LIMA1Q9UHB6 759 aaKnown RBP13.7□□□□□ -0.22
PMS1-204ENST00000409823 SIP14410 1827 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 TRIM43BA6NCK2 446 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 ZNF233A6NK53 670 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 OGTO15294 1046 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 STAG3L1P0CL83 205 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 TRIM59Q8IWR1 403 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 ZNF710Q8N1W2 664 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 RNF169Q8NCN4 708 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 TRIM43Q96BQ3 446 aaPredicted RBP13.69□□□□□ -0.22
PMS1-204ENST00000409823 TBX21Q9UL17 535 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 MEIS3P2A8K0S8 358 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 SLC16A3O15427 465 aaKnown RBP13.69□□□□□ -0.22
PMS1-204ENST00000409823 GNA14O95837 355 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 BFSP1Q12934 665 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 FRMD5Q7Z6J6 570 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 FBXL18Q96ME1 805 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 ADAM2Q99965 735 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 CRACR2AQ9BSW2 395 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 ERVK-5Q9HDB9 667 aa13.69□□□□□ -0.22
PMS1-204ENST00000409823 CAND2O75155 1236 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 ZSCAN20P17040 1043 aaPredicted RBP13.68□□□□□ -0.22
PMS1-204ENST00000409823 VAMP7P51809 220 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 UBXN1Q04323 297 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 CYP24A1Q07973 514 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 KCNH2Q12809 1159 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 ENOX2Q16206 610 aaKnown RBP13.68□□□□□ -0.22
PMS1-204ENST00000409823 UBXN11Q5T124 520 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 DBF4BQ8NFT6 615 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 LPPQ93052 612 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 SLC35C1Q96A29 364 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 ELMO3Q96BJ8 720 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 NDST4Q9H3R1 872 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 KLK14Q9P0G3 267 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 PTPRJQ12913 1337 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 TET1Q8NFU7 2136 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 LRRC10BA6NIK2 292 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 MEFVO15553 781 aaPredicted RBP13.68□□□□□ -0.22
PMS1-204ENST00000409823 MCF2P10911 925 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 KRT13P13646 458 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 GCLMP48507 274 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 ZNF75DP51815 510 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 TCTN1Q2MV58 587 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 SPC24Q8NBT2 197 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 MKNK1Q9BUB5 465 aa13.68□□□□□ -0.22
PMS1-204ENST00000409823 CPSF3Q9UKF6 684 aaKnown RBP13.68□□□□□ -0.22
PMS1-204ENST00000409823 KLK7P49862 253 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 PCBP1Q15365 356 aaKnown RBP eCLIP13.67□□□□□ -0.22
PMS1-204ENST00000409823 MAN2A1Q16706 1144 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 CBWD6Q4V339 395 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 CBWD3Q5JTY5 395 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 CBWD5Q5RIA9 395 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 SCARA3Q6AZY7 606 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 SARM1Q6SZW1 724 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 INTS8Q75QN2 995 aaKnown RBP13.67□□□□□ -0.22
PMS1-204ENST00000409823 IPPQ9Y573 584 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 PCDHB2Q9Y5E7 798 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 A0A1B0GTH6 734 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 LRRIQ3A6PVS8 624 aaPredicted RBP13.67□□□□□ -0.22
PMS1-204ENST00000409823 LRRN2O75325 713 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 LDHAP00338 332 aaKnown RBP13.67□□□□□ -0.22
PMS1-204ENST00000409823 TNNI1P19237 187 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 MARSP56192 900 aaKnown RBP13.67□□□□□ -0.22
PMS1-204ENST00000409823 APBA1Q02410 837 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 PPP3CAQ08209 521 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 RBL2Q08999 1139 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 NR1I3Q14994 352 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 GLRA4Q5JXX5 417 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 C1orf220Q5T0J3 134 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 PARD3BQ8TEW8 1205 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 TMEM174Q8WUU8 243 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 FNBP1Q96RU3 617 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 METTL14Q9HCE5 456 aaKnown RBP13.67□□□□□ -0.22
PMS1-204ENST00000409823 RTN4Q9NQC3 1192 aaKnown RBP13.67□□□□□ -0.22
PMS1-204ENST00000409823 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
PMS1-204ENST00000409823 RAG1P15918 1043 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 AXLP30530 894 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 FILIP1LQ4L180 1135 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 RTN4RL1Q86UN2 441 aaPredicted RBP13.66□□□□□ -0.22
PMS1-204ENST00000409823 SMG8Q8ND04 991 aaKnown RBP13.66□□□□□ -0.22
PMS1-204ENST00000409823 MFSD14AQ96MC6 490 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 ACAP3Q96P50 834 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
PMS1-204ENST00000409823 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 TPM2P07951 284 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 CSF2RAP15509 400 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 SYN1P17600 705 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 AFF1P51825 1210 aaKnown RBP13.66□□□□□ -0.22
PMS1-204ENST00000409823 SLC10A6Q3KNW5 377 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 DRC7Q8IY82 874 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 C7orf61Q8IZ16 206 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 USP38Q8NB14 1042 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 KIAA1586Q9HCI6 787 aa13.66□□□□□ -0.22
PMS1-204ENST00000409823 LGALS16A8MUM7 142 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms