RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 PIGRP01833 764 aa34.13■■■■□ 3.05
TRAF3IP1-203ENST00000409739 PFKFB1P16118 471 aa34.13■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ABCD1P33897 745 aa34.13■■■■□ 3.05
TRAF3IP1-203ENST00000409739 KRT17Q04695 432 aa34.13■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ZC2HC1CQ53FD0 456 aaPredicted RBP34.13■■■■□ 3.05
TRAF3IP1-203ENST00000409739 MAP4K3Q8IVH8 894 aa34.13■■■■□ 3.05
TRAF3IP1-203ENST00000409739 TMEM169Q96HH4 297 aa34.13■■■■□ 3.05
TRAF3IP1-203ENST00000409739 PYM1Q9BRP8 204 aaKnown RBP34.13■■■■□ 3.05
TRAF3IP1-203ENST00000409739 PANK4Q9NVE7 773 aa34.13■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ANK1P16157 1881 aa34.13■■■■□ 3.05
TRAF3IP1-203ENST00000409739 HNRNPDLO14979 420 aaKnown RBP34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 PPP1R37O75864 691 aa34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 HARSP12081 509 aaKnown RBP34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ERVFC1P60507 584 aa34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ZNF720Q7Z2F6 126 aa34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 CCDC94Q9BW85 323 aaPredicted RBP34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 HAPLN2Q9GZV7 340 aa34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 MRPL44Q9H9J2 332 aaKnown RBP34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 OLFML3Q9NRN5 406 aa34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 TBC1D7Q9P0N9 293 aa34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 THEGQ9P2T0 379 aa34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 PUF60Q9UHX1 559 aaKnown RBP34.12■■■■□ 3.05
TRAF3IP1-203ENST00000409739 SPTBN5Q9NRC6 3674 aaKnown RBP34.11■■■■□ 3.05
TRAF3IP1-203ENST00000409739 A0A1B0GVL5 298 aa34.11■■■■□ 3.05
TRAF3IP1-203ENST00000409739 FSCN2O14926 492 aa34.11■■■■□ 3.05
TRAF3IP1-203ENST00000409739 LIG4P49917 911 aa34.11■■■■□ 3.05
TRAF3IP1-203ENST00000409739 OSTNP61366 133 aa34.11■■■■□ 3.05
TRAF3IP1-203ENST00000409739 AMPD3Q01432 767 aa34.11■■■■□ 3.05
TRAF3IP1-203ENST00000409739 MCL1Q07820 350 aa34.11■■■■□ 3.05
TRAF3IP1-203ENST00000409739 HERC4Q5GLZ8 1057 aaPredicted RBP34.11■■■■□ 3.05
TRAF3IP1-203ENST00000409739 HPSEQ9Y251 543 aa34.11■■■■□ 3.05
TRAF3IP1-203ENST00000409739 NRP1O14786 923 aa34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 CLDN3O15551 220 aa34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 COASYQ13057 564 aa34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 CNNM4Q6P4Q7 775 aa34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ADGRD2Q7Z7M1 963 aa34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 CCDC65Q8IXS2 484 aa34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 HVCN1Q96D96 273 aa34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 STRA6Q9BX79 667 aa34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 MARCH5Q9NX47 278 aa34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 FAN1Q9Y2M0 1017 aa34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 PRG3Q9Y2Y8 225 aaPredicted RBP34.1■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ALDH2P05091 517 aa34.09■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ANP32AP39687 249 aaKnown RBP34.09■■■■□ 3.05
TRAF3IP1-203ENST00000409739 SLC39A4Q6P5W5 647 aa34.09■■■■□ 3.05
TRAF3IP1-203ENST00000409739 C7orf25Q9BPX7 421 aa34.09■■■■□ 3.05
TRAF3IP1-203ENST00000409739 TCF25Q9BQ70 676 aa34.09■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ENTPD7Q9NQZ7 604 aa34.09■■■■□ 3.05
TRAF3IP1-203ENST00000409739 SERTAD1Q9UHV2 236 aa34.09■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ACTN4O43707 911 aaKnown RBP34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 MATR3P43243 847 aaKnown RBP eCLIP34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 OR1G1P47890 313 aa34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 CASP5P51878 434 aa34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 ASIC1P78348 528 aa34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 HYAL1Q12794 435 aa34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 PLPP4Q5VZY2 271 aa34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 PDE12Q6L8Q7 609 aaKnown RBP34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 DDX53Q86TM3 631 aaKnown RBP34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 MICAL1Q8TDZ2 1067 aa34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 VN1R3Q9BXE9 311 aa34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 FGFBP2Q9BYJ0 223 aa34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 TOPORSQ9NS56 1045 aaPredicted RBP34.08■■■■□ 3.05
TRAF3IP1-203ENST00000409739 FAM237AA0A1B0GTK4 181 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 A0A1W2PQ27 194 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 A0A1W2PQ64 194 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 A0A1W2PQD8 194 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 GCNT3O95395 438 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 THP07101 528 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 YARSP54577 528 aaKnown RBP34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 TUSC3Q13454 348 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 NAB2Q15742 525 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 CEP57L1Q8IYX8 460 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 ACAP3Q96P50 834 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 CACNG4Q9UBN1 327 aa34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 CIZ1Q9ULV3 898 aaPredicted RBP34.07■■■■□ 3.04
TRAF3IP1-203ENST00000409739 SLFN14P0C7P3 912 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 MYBP10242 640 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 CASP1P29466 404 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 COL19A1Q14993 1142 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 SEZ6Q53EL9 994 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 GLRA4Q5JXX5 417 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 VPS52Q8N1B4 723 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 HLA-CQ95604 372 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 PPP2R3CQ969Q6 453 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 SNX27Q96L92 541 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 ZBP1Q9H171 429 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 COG5Q9UP83 839 aa34.06■■■■□ 3.04
TRAF3IP1-203ENST00000409739 F8W810 466 aa34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 MEFVO15553 781 aaPredicted RBP34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 GTF2F1P35269 517 aaKnown RBP eCLIP34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 AFMP43652 599 aa34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 NDUFA8P51970 172 aa34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 KCNA1Q09470 495 aa34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 TPRNQ4KMQ1 711 aa34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 XKR4Q5GH76 650 aa34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 L1TD1Q5T7N2 865 aaKnown RBP34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 ALKAL1Q6UXT8 129 aa34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 TMC7Q7Z402 723 aa34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 GRAMD1CQ8IYS0 662 aa34.05■■■■□ 3.04
TRAF3IP1-203ENST00000409739 FSIP1Q8NA03 581 aa34.05■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms